| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,332 | G→T | 2.1% | intergenic (‑128/‑177) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,332 | 0 | G→T | 2.1% | 4.6 ‑0.9 ‑0.3 | 254 | intergenic (‑128/‑177) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (4/2): ref base (111/137): total (115/139) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.15e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.47e-01 | ||||||||||
Only 100 of 284 total aligned reads displayed.
ATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTC > NC_014034/2249233‑2249431
|
aTGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...gggg..g < 2:4422066/101‑1 (MQ=255)
tGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...gggg..gg > 2:1668859/1‑101 (MQ=255)
tGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCCCAGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGGC...gggg..gg > 1:440113/1‑101 (MQ=39)
gCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGc > 2:5463407/1‑101 (MQ=255)
gCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGc > 1:4076101/1‑101 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCt > 1:5077393/1‑101 (MQ=255)
cacaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCt > 2:1964935/1‑101 (MQ=255)
ccaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCtt < 2:277527/100‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTc > 1:3071001/1‑101 (MQ=255)
aTACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCAt > 2:49075/1‑101 (MQ=255)
aTACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCAt < 2:4049277/101‑1 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt < 2:4470016/101‑1 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt < 1:978637/101‑1 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt > 1:3582926/1‑101 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt < 2:3311615/101‑1 (MQ=255)
ccGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCtt < 1:382068/101‑1 (MQ=255)
cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg < 1:890501/101‑1 (MQ=255)
cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg < 2:3005645/101‑1 (MQ=255)
cGCAGCTGGGGCCCCGTGGGCAAGAAGGGGGATCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg < 2:804596/101‑1 (MQ=37)
cAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGcc > 2:4923532/1‑101 (MQ=255)
ttGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaa > 1:4238100/1‑101 (MQ=255)
ttGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaa < 2:507003/101‑1 (MQ=255)
tGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaaa < 2:4824643/101‑1 (MQ=255)
ggCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAata < 1:5451581/101‑1 (MQ=255)
ggCACCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAata < 1:4716094/101‑1 (MQ=255)
aCCCGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGGAAATATcc > 1:153183/1‑101 (MQ=255)
cccGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATccc < 1:49086/101‑1 (MQ=255)
ccGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCg < 1:46576/101‑1 (MQ=255)
cGGGGCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgg < 1:2253609/101‑1 (MQ=255)
ggggCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggg < 2:1109196/101‑1 (MQ=255)
ggCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggggg < 2:4536711/101‑1 (MQ=255)
ggCAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggggg > 2:2530781/1‑101 (MQ=255)
cAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGt < 2:2671403/101‑1 (MQ=255)
cAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGt < 1:3315069/101‑1 (MQ=255)
cAAGAAGGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGt < 1:2533352/101‑1 (MQ=255)
aagaagGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGTTATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCAggggggag > 1:2369400/1‑99 (MQ=38)
aagaagGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg < 2:3369866/101‑1 (MQ=255)
aagaagGGGGCTCTGCCCCC.GTCCAGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg > 2:2474096/1‑101 (MQ=255)
gaagGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaa < 1:2761766/101‑1 (MQ=255)
gaagGGGGCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaa < 2:1758733/101‑1 (MQ=255)
gaagGGGGCTCGGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaa < 1:2945530/101‑1 (MQ=255)
ggggCTCTGCCCCC.GTCCCTTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:2369266/101‑1 (MQ=255)
ggggCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:4654860/101‑1 (MQ=255)
ggggCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:5601140/101‑1 (MQ=255)
ggCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcgc > 2:5143000/1‑101 (MQ=255)
ggCTCTGCCCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcgc < 2:1902201/101‑1 (MQ=255)
ctgccccc.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc > 1:3558700/5‑101 (MQ=255)
tgccccc.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCa > 2:2893922/4‑101 (MQ=255)
gccccc.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 2:4361792/3‑101 (MQ=255)
gccccc.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag < 1:1497574/99‑1 (MQ=255)
gccccc.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag < 2:2252455/99‑1 (MQ=255)
cccc.GTCCCGGGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag < 2:2080871/101‑1 (MQ=255)
cacatccagtACCGGGACT.CCCCCGGGATATTTGAGGCAAGCTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgg < 2:5704248/97‑1 (MQ=37)
ccatcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggg < 1:2896283/98‑1 (MQ=255)
c.gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 2:475349/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 1:2258931/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg > 2:1499338/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.c < 1:3253733/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg > 1:374616/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg < 2:5103290/101‑1 (MQ=255)
gcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggg < 1:668318/95‑1 (MQ=18)
gcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggg < 2:5238796/95‑1 (MQ=18)
caagcggACTCCCCCCGGGATATTTGCAGCAAGCTGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGG.c < 1:4983535/96‑1 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.cg.c > 1:2606070/1‑101 (MQ=255)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.cg.c > 2:108129/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccc > 1:1861457/1‑101 (MQ=255)
ggccT.CCCCCGGGATATTGGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccc < 1:1024759/98‑1 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccc < 2:5644335/101‑1 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccccctt < 1:3172465/101‑4 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccccctt < 1:4220541/101‑4 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccccttc > 2:3809318/1‑97 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccccttc > 1:3511685/1‑97 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccccttc > 2:4185741/1‑97 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTcgc > 2:3213230/1‑101 (MQ=255)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCCCC.tgc > 1:1041015/1‑99 (MQ=2)
cccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTcgcg > 2:3663376/1‑101 (MQ=255)
cgcgATAATAGAGGCAAGCTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCCCATTCgcggg < 2:2155548/98‑1 (MQ=25)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCCCC.tgccc > 2:4065635/1‑97 (MQ=2)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCgcgggc > 1:2198455/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCgcgggcg > 1:1103886/1‑101 (MQ=255)
gATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCgcgggcgg < 1:5228203/101‑1 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGcc < 1:5614770/101‑1 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAAGATCCGGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGcc < 1:1374223/101‑1 (MQ=37)
tgtGAGGCAAGATGGA...GGCG..GGCTTTAATCTTGCCGAAAATATCGCGGTGGGGGAA.GGGCGCA..GCTAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCcgc < 2:3864858/99‑1 (MQ=21)
tGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGa > 1:1217705/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..TGCGTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGAc < 2:4309113/101‑1 (MQ=25)
aGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGAcg > 2:4950824/1‑101 (MQ=255)
gCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGAcgcg > 1:5656395/1‑101 (MQ=255)
cAAGATGAA...GGGG..GCCTTTCATCTGGCCGAAAATATGCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGAcgcgc < 2:2175851/101‑1 (MQ=37)
aGATGAG...GGGG..TGTTTTAATCTGGCAAAAAATACCCGGGGGGGTGAA.GGGCGCA..GCCAGGGGGGGG.CAGCCC.CCCCC.TTCGCGGGCGGCCGCGACgcgcgc < 2:3958692/101‑1 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGcgcc < 1:428638/101‑1 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGcgcc > 1:5389961/1‑101 (MQ=255)
gga...GGGG..GGTTTTTCTTTTTGCGAAAATTGCCCGGGGGGGGAAGGGGCCCC..GCCGGGGGGGGGCCCC.CC.CCCCC.TTCGCGGGCGGCCGCGACGCGcgccgc < 1:1965046/99‑1 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:1283618/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:1692353/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 1:3393478/1‑101 (MQ=255)
gatggtg..ggCTTTCAACTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:744295/95‑1 (MQ=25)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 2:3586704/1‑101 (MQ=255)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 2:1409554/1‑101 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc < 2:5398942/101‑1 (MQ=255)
|
ATGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCCC.GTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTC > NC_014034/2249233‑2249431
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|