| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,348 | A→G | 4.8% | intergenic (‑144/‑161) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,348 | 0 | A→G | 4.8% | 21.1 ‑0.6 ‑0.6 | 250 | intergenic (‑144/‑161) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (7/5): ref base (117/121): total (124/126) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.69e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.50e-01 | ||||||||||
Only 100 of 280 total aligned reads displayed.
GCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.G.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATT > NC_014034/2249249‑2249447
|
tGGGCACCCGGGGCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaaa < 2:4824643/101‑1 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat > 2:4113417/1‑101 (MQ=255)
ggCACCCGGGGCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAata < 2:4960847/101‑1 (MQ=255)
cccGGGGCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATccc < 1:3172817/101‑1 (MQ=255)
cccGGGGCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATccc < 1:2900064/101‑1 (MQ=255)
ccGGGGCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCg < 1:5313274/101‑1 (MQ=255)
cGGGGCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgg > 2:3257542/1‑101 (MQ=255)
cGGGGCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgg < 1:2253609/101‑1 (MQ=255)
gggCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgggg < 2:5329162/101‑1 (MQ=255)
ggCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggggg > 2:2530781/1‑101 (MQ=255)
ggCAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggggg < 2:4536711/101‑1 (MQ=255)
gaagcagGGGGCTCTCC.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGt < 1:912409/100‑1 (MQ=37)
cAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGt < 1:5671797/101‑1 (MQ=255)
cAAGAAGGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGt < 1:2533352/101‑1 (MQ=255)
aagaagGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGTTATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCAggggggag > 1:2369400/1‑99 (MQ=38)
aagaagGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgggggggg > 1:2575173/1‑99 (MQ=255)
aagaagGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCAGAAAATATCCCGGGGGGTg < 1:4499628/101‑1 (MQ=255)
aagaagGGGGCTCT.GCCCC.CGTCCAGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg > 2:2474096/1‑101 (MQ=255)
aagaagGGAGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg > 2:169533/1‑101 (MQ=255)
agaagGGGGCTCG.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTCCTGAAAATATCCCGTGGGGTGa < 2:191458/101‑1 (MQ=37)
gaagGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaa < 1:2761766/101‑1 (MQ=255)
aagGGGGCTCT.GCCCC.CTTCCCGTGCCGGGCCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.t < 2:2017801/101‑1 (MQ=37)
aagGGGGCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.t < 2:5175881/101‑1 (MQ=255)
ggggCTCT.GCCCC.CGTCCCTTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:2369266/101‑1 (MQ=255)
ggggCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:4654860/101‑1 (MQ=255)
ggggCTCT.GCCCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:5601140/101‑1 (MQ=255)
ct.G.CCCGCGTCCCGGGCCGGGACT.CCCGCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc < 1:3555305/101‑1 (MQ=37)
tgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCa < 2:5077108/98‑1 (MQ=255)
tgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCa < 1:3618486/98‑1 (MQ=255)
tgcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCa > 2:2893922/4‑101 (MQ=255)
tccccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..CCCa < 2:4908152/98‑1 (MQ=255)
gcccc.cGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag < 1:1497574/99‑1 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 2:475349/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg > 2:1499338/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 2:4370485/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.Ca > 2:2728021/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGG.cg > 1:1104936/1‑100 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg > 1:374616/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg > 1:3071048/1‑101 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.c < 1:2671209/101‑1 (MQ=255)
gcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggg < 1:668318/95‑1 (MQ=18)
tGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.cg > 2:5475188/1‑101 (MQ=255)
caagcggACTCCCCCCGGGATATTTGCAGCAAGCTGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGG.c < 1:4983535/96‑1 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.cg.c > 2:108129/1‑101 (MQ=255)
ggccT.CCCCCGGGATATTGGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccc < 1:1024759/98‑1 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccc > 2:4051320/1‑101 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccc > 1:4269649/1‑101 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccccctt < 1:4220541/101‑4 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccccttc > 2:580828/1‑97 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccccttc < 2:3468414/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccccttc > 2:3809318/1‑97 (MQ=255)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCCCC.tgc > 1:1041015/1‑99 (MQ=2)
cccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTcgcg > 2:1122441/1‑101 (MQ=255)
ccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCgcgg < 2:1759336/101‑1 (MQ=255)
cgcgATAATAGAGGCAAGCTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCCCATTCgcggg < 2:2155548/98‑1 (MQ=25)
cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCgcggg < 1:5463697/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCgcgggc < 1:3268213/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCgcgggc > 1:2198455/1‑101 (MQ=255)
gATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCCCC.tgccccgc > 2:4463974/1‑94 (MQ=2)
gATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCgcgggcgg > 1:4712468/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGggcggc > 2:5111094/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAAGATCCGGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGcc < 1:1374223/101‑1 (MQ=37)
tgtGAGGCAAGATGGA...GGCG..GGCTTTAATCTTGCCGAAAATATCGCGGTGGGGGAA.GGGCGCA..GCTAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCcgc < 2:3864858/99‑1 (MQ=21)
gAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGAc > 1:5427229/1‑101 (MQ=255)
gCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGAcgcg > 1:5656395/1‑101 (MQ=255)
gCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGAcgcg < 2:2212496/101‑1 (MQ=255)
aaGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGAccggcg > 1:3044340/1‑96 (MQ=25)
aGATGAG...GGGG..TGTTTTAATCTGGCAAAAAATACCCGGGGGGGTGAA.GGGCGCA..GCCAGGGGGGGG.CAGCCC.CCCCC.TTCGCGGGCGGCCGCGACgcgcgc < 2:3958692/101‑1 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGcgcc > 1:4795376/1‑101 (MQ=255)
gga...GGGG..GGTTTTTCTTTTTGCGAAAATTGCCCGGGGGGGGAAGGGGCCCC..GCCGGGGGGGGGCCCC.CC.CCCCC.TTCGCGGGCGGCCGCGACGCGcgccgc < 1:1965046/99‑1 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:3033965/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGA.GGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:5670334/1‑101 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:1283618/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:1692353/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 1:3393478/1‑101 (MQ=255)
gatggtg..ggCTTTCAACTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:744295/95‑1 (MQ=25)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 2:3586704/1‑101 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGt < 1:2292518/101‑1 (MQ=255)
cTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGt < 1:4143724/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:5154420/1‑101 (MQ=255)
tttCATCTTGCCAAAAATACCGGGGGGGGTAAA.GGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 1:61000/101‑1 (MQ=37)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 1:1873326/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 1:4592799/1‑101 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcccc > 1:34726/1‑101 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGGCGTGcccc > 2:4949254/1‑101 (MQ=37)
tCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt > 2:563883/1‑101 (MQ=255)
tCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt > 1:4329083/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt < 2:4269389/101‑1 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:1561900/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:1313696/1‑101 (MQ=255)
ttGCCGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 2:4344078/101‑1 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt > 2:3708063/1‑101 (MQ=255)
tGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGAGGCGCGCCGCAACAGGTCGTGCCCCgttc > 1:1270002/1‑100 (MQ=37)
gCCGAAAATATCCCAGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGt > 2:1020012/1‑101 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc > 2:2255458/1‑101 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:2629578/101‑1 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa < 2:787291/101‑1 (MQ=255)
gAAAATGTCCGGGTGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CGG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt < 1:3809560/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 2:422137/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt < 2:374572/101‑1 (MQ=255)
|
GCTTGGGCACCCGGGGCAAGAAGGGGGCTCT.G.CCC.CGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCCC.TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATT > NC_014034/2249249‑2249447
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|