BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,640,174	G→A	100%	intergenic (‑150/+126)	thrS ← / ← RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,640,174	0	G→A	100.0%	384.5	138	intergenic (‑150/+126)	thrS/RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein
Reads supporting (aligned to +/- strand): new base (60/70): ref base (0/2): total (61/77)

Only 100 of 148 total aligned reads displayed.


GCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GG.CTTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCC  >  NC_014034/2640078‑2640272


gcgcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCAccc                                                                                                 <  1:3559340/101‑1 (MQ=255)


  gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCAccccc                                                                                               <  1:2237713/101‑1 (MQ=255)


  gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCAccccc                                                                                               <  2:4376487/101‑1 (MQ=255)


   ccGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCAcccccc                                                                                              <  1:2377719/101‑1 (MQ=255)


   ccGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCAcccccc                                                                                              <  2:5614404/101‑1 (MQ=255)


      ggTATGCGGCGCGGCGGTAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAg                                                                                           <  1:2432509/101‑1 (MQ=25)


      ggTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAg                                                                                           <  2:5532519/101‑1 (MQ=255)


       gTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAgg                                                                                          <  2:3447249/101‑1 (MQ=255)


         aTGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCCC.TT.GGCCTTCGGCCCCTTCAccccccccagga                                                                                        >  2:4440836/1‑95 (MQ=25)


         aTGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAAGGGGGGGCGGCCCCCCCCTTT.GC.CTTTGGCCAAATCAccccccccggga                                                                                        >  1:3764798/1‑95 (MQ=255)


          tGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTAt                                                                                       <  2:3945141/101‑1 (MQ=255)


             gACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCCCCCCCCGAGGTCTTTg                                                                                    >  2:1754583/1‑101 (MQ=37)


                   gcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCaa                                                                              <  2:1521140/101‑1 (MQ=37)


                   gcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCaa                                                                              <  2:2526534/101‑1 (MQ=37)


                    cggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAg                                                                             <  2:4593755/101‑1 (MQ=37)


                    cggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAg                                                                             <  2:1412454/101‑1 (MQ=25)


                      gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt                                                                           <  2:1535203/101‑1 (MQ=37)


                      gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt                                                                           <  1:285942/101‑1 (MQ=37)


                        aGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCACCTC.TT.GGCCTTCGGCCAATTCACCCCCCCCGGTATTTGGAGCAAGATGa                                                                         >  2:1223828/1‑101 (MQ=25)


                         ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaa                                                                        <  2:2036113/101‑1 (MQ=25)


                         gaaaggtCAACGGAGGCGCTGTTGCGCGGGCAAAAGGGGGGCGTGGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGATCAAGATGaa                                                                        <  1:1088237/96‑1 (MQ=18)


                            gtgtCAGCCGGGGCCCTTTTGCGCAGGGAAAAGGGGGGCGCTGCCCCCCTC.CT.GGCCTTCGGGCAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaaaga                                                                     <  1:4690161/101‑3 (MQ=18)


                                cAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTACCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCAt                                                                <  2:1437485/101‑1 (MQ=25)


                                 aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg                                                               <  1:4009758/101‑1 (MQ=25)


                                   ccGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATggg                                                             <  2:3086863/101‑1 (MQ=25)


                                    cGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGt                                                            <  1:802951/101‑1 (MQ=25)


                                      tGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc                                                          <  2:4230573/101‑1 (MQ=25)


                                       ggCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCa                                                         <  2:535389/101‑1 (MQ=25)


                                          gcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCt                                                      <  1:1050008/101‑1 (MQ=25)


                                          gcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCt                                                      <  1:1376150/101‑1 (MQ=21)


                                                  gcAGGCAAAAGGGGGGCGCTGCCCCCCCC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaa                                              <  1:2412777/101‑1 (MQ=25)


                                                   cacgCAAAAGGGGGGCGCTGCCCCCCTC.TTGGG.CTTCGGCCCATTTACCCCCCGAGGGATTTGGGGCAAAATG.AAAGACCCTGGGTTTATTTTGCCTCaaa                                             >  1:3859305/4‑101 (MQ=16)


                                                    aGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat                                            <  2:4445298/101‑1 (MQ=21)


                                                     ggCAAAAGGGGGGCGCTGCCCCCCTCTTT.GC.CTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.GAAGACCATGGGTTCATTTTGCCTCAAata                                           >  2:4396765/1‑101 (MQ=21)


                                                     cccgaaaAGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat                                          >  1:3613185/5‑101 (MQ=17)


                                                      gCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCCCCCCCCGAGGTATTTGGGGCCAGATG.AAAGACCATGGGGTTATCTTTCCTCCAatat                                          >  1:3396239/1‑101 (MQ=17)


                                                      gCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat                                          <  1:1847421/101‑1 (MQ=21)


                                                      gCAAAAGGGGCGCGCCTCCCCCCTC.TT.GGCCTTCGGCCAATTCGCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat                                          <  2:2183357/101‑1 (MQ=25)


                                                       tgaaaAGGGGGCGCTGCCCCCCTC.TT.GGCCTTCTGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATcc                                        <  1:4925300/99‑1 (MQ=17)


                                                        gaaaAGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCCGGATATTTGCGGCAAGGGGAAAGGA.TGGGGGTT.ATCTTGCCCCCAATATccc                                       >  1:2075324/2‑101 (MQ=9)


                                                         aaaAGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg                                      <  1:4119471/101‑1 (MQ=17)


                                                         aaaAGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg                                      >  2:4791669/1‑101 (MQ=17)


                                                          aaagggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg                                     >  1:1855996/4‑101 (MQ=17)


                                                          aaGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCg                                      <  2:4554574/101‑1 (MQ=25)


                                                           aagggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGACCCAAATATCCCggg                                    >  1:3353817/3‑101 (MQ=17)


                                                            ggggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg                                    >  1:5782600/1‑101 (MQ=21)


                                                            agggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg                                   <  2:5208637/100‑1 (MQ=18)


                                                             gggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg                                  <  1:2358007/101‑1 (MQ=18)


                                                             gggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg                                  >  1:3540700/1‑101 (MQ=18)


                                                             gggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg                                  >  2:3177246/1‑101 (MQ=18)


                                                             gggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggg                                   >  2:4815310/1‑101 (MQ=25)


                                                              ggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggt                                 <  1:2005554/101‑2 (MQ=18)


                                                               gggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg                                 <  1:1754682/101‑1 (MQ=25)


                                                               gggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtg                                <  1:3393296/101‑3 (MQ=18)


                                                               gggCCCCGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg                                 <  1:3942700/101‑1 (MQ=21)


                                                                ggCGCTGCCCCCCTC.TTGGG.CTTCGGCCAAGTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa                                <  1:4327505/101‑1 (MQ=25)


                                                                ggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga                               >  2:1178424/1‑98 (MQ=18)


                                                                ggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga                               <  2:2299783/101‑4 (MQ=21)


                                                                ggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa                                <  2:1184804/101‑1 (MQ=25)


                                                                 gcgcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag                              <  2:3114982/101‑5 (MQ=21)


                                                                  cgcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgagg                             <  2:4543097/101‑6 (MQ=21)


                                                                  cgcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCCCGGTATTTTGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggggggggc                              >  1:1569981/1‑98 (MQ=21)


                                                                  cgcCGCCCCCCTC..G.GG.CTTC.GCCAA.TCGCCCCCCGGGATATTTCGGGCAAGATGAAAGGCATCCGGTTTCATCTTGCTGCAAATATCCCGGGGGGAGTccg                           <  2:2060213/101‑2 (MQ=17)


                                                                   gcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc                            >  2:341214/1‑95 (MQ=21)


                                                                   gcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTc                             >  2:2350610/1‑101 (MQ=25)


                                                                    cTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggcg                           >  2:3327273/1‑94 (MQ=25)


                                                                     tGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggggaggcga                          >  1:1368990/1‑94 (MQ=21)


                                                                     tGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt                           <  1:1222562/101‑1 (MQ=25)


                                                                     tGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt                           >  2:684030/1‑101 (MQ=25)


                                                                      gCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCCCGGTATTTTGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGCGGGGAGTCCtc                          >  2:3333491/1‑100 (MQ=25)


                                                                      gCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCCAGGGATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCCGGGGGAGGCCTg                          >  2:609878/1‑101 (MQ=25)


                                                                       ccccccTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGGATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGa                         >  2:4108986/1‑101 (MQ=25)


                                                                        cccccTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCTGaa                        >  2:3938958/1‑101 (MQ=25)


                                                                          cccTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg                      >  2:4566733/1‑101 (MQ=37)


                                                                            ctc.tT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTTAAAGGa                    >  1:952612/1‑101 (MQ=25)


                                                                            ctc.tT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa                    <  1:5235355/101‑1 (MQ=37)


                                                                             tc.tT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc                   <  2:5167840/101‑1 (MQ=37)


                                                                                 ttggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg                 >  1:2715115/6‑101 (MQ=37)


                                                                                 ttggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg                 >  2:2135986/6‑101 (MQ=37)


                                                                                 ttggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg                 <  1:1039159/96‑1 (MQ=37)


                                                                                  tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                >  1:1488014/5‑101 (MQ=37)


                                                                                  tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                >  1:1281741/5‑101 (MQ=37)


                                                                                  tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                >  2:85464/5‑101 (MQ=37)


                                                                                  tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                >  2:4207044/5‑101 (MQ=37)


                                                                                     ccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggggg             <  2:5782305/100‑1 (MQ=37)


                                                                                      cTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc            >  2:1790986/1‑101 (MQ=37)


                                                                                      cTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc            <  1:3232990/101‑1 (MQ=255)


                                                                                        tCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCag          >  2:112307/1‑101 (MQ=255)


                                                                                         cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga         >  1:83945/1‑101 (MQ=255)


                                                                                         cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga         <  1:2264790/101‑1 (MQ=255)


                                                                                         cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga         <  1:1533075/101‑1 (MQ=255)


                                                                                          ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag        >  1:5661350/1‑101 (MQ=255)


                                                                                            ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc      >  1:3694064/1‑101 (MQ=37)


                                                                                             cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc     >  1:3734828/1‑101 (MQ=37)


                                                                                              aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc    >  2:910250/1‑101 (MQ=37)


                                                                                              aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc    >  1:4386708/1‑101 (MQ=37)


                                                                                               aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAATGACGGGGGGCAGAGccccc   >  1:3248765/1‑101 (MQ=37)


                                                                                               aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc   >  2:2729966/1‑101 (MQ=255)


                                                                                               aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc   >  2:3229352/1‑101 (MQ=37)


                                                                                                ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc  >  1:4570900/1‑101 (MQ=25)


GCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GG.CTTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCC  >  NC_014034/2640078‑2640272

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG