| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,640,184 | G→A | 19.5% | intergenic (‑160/+116) | thrS ← / ← RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,640,184 | 0 | G→A | 19.5% | 74.7 0.0 0.0 | 153 | intergenic (‑160/+116) | thrS/RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (15/15): ref base (59/64): total (74/79) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 168 total aligned reads displayed.
GTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GG.CTTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTC > NC_014034/2640085‑2640285
|
tGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTAt < 2:3945141/101‑1 (MQ=255)
tGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTAt < 2:3665347/101‑1 (MQ=255)
cGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.CT.GGCCCTCTGCCAATTCCCCCCCCGCGGGAttt > 2:2264664/1‑101 (MQ=25)
gACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCCCCCCCCGAGGTCTTTg > 2:1754583/1‑101 (MQ=37)
gcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCaa < 2:5268482/101‑1 (MQ=37)
gcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCaa < 2:2526534/101‑1 (MQ=37)
ggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGa < 1:1830338/101‑1 (MQ=37)
gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt < 1:285942/101‑1 (MQ=37)
gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt < 2:1535203/101‑1 (MQ=37)
cAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATg < 1:2467963/101‑1 (MQ=25)
aGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCACCTC.TT.GGCCTTCGGCCAATTCACCCCCCCCGGTATTTGGAGCAAGATGa > 2:1223828/1‑101 (MQ=25)
ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaa < 2:2036113/101‑1 (MQ=25)
gtgtCAGCCGGGGCCCTTTTGCGCAGGGAAAAGGGGGGCGCTGCCCCCCTC.CT.GGCCTTCGGGCAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaaaga < 1:4690161/101‑3 (MQ=18)
gtgtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaaga < 1:154107/101‑3 (MQ=25)
tgtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGGATTTGGAGCAAGATGaaagac > 2:3232790/1‑98 (MQ=25)
cAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTACCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCAt < 2:1437485/101‑1 (MQ=25)
aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg < 1:4438297/101‑1 (MQ=21)
aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg < 1:4009758/101‑1 (MQ=25)
ccGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATggg < 2:3086863/101‑1 (MQ=25)
gcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCt < 1:1050008/101‑1 (MQ=25)
gcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCt < 1:1376150/101‑1 (MQ=21)
tGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCt < 2:2800121/101‑1 (MQ=25)
gcgcAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc < 2:4815659/101‑1 (MQ=25)
aGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat < 2:4445298/101‑1 (MQ=21)
ggCAAAAGGGGGGCGCTGCCCCCCTCTTT.GC.CTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.GAAGACCATGGGTTCATTTTGCCTCAAata > 2:4396765/1‑101 (MQ=21)
cccgaaaAGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat > 1:3613185/5‑101 (MQ=17)
gCAAAAGGGGCGCGCCTCCCCCCTC.TT.GGCCTTCGGCCAATTCGCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat < 2:2183357/101‑1 (MQ=25)
gaaaAGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc < 1:3834882/100‑1 (MQ=17)
gaaaAGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCCGGATATTTGCGGCAAGGGGAAAGGA.TGGGGGTT.ATCTTGCCCCCAATATccc > 1:2075324/2‑101 (MQ=9)
aaaAGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg < 1:4119471/101‑1 (MQ=17)
aaaAGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg > 2:4791669/1‑101 (MQ=17)
aaagggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg > 1:1855996/4‑101 (MQ=17)
aaGGGGGGCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCg < 2:4554574/101‑1 (MQ=25)
aagggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggg > 1:1167496/3‑101 (MQ=18)
aagggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggg > 1:1867500/3‑101 (MQ=18)
aagggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggg < 1:2114397/99‑1 (MQ=18)
aagggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGACCCAAATATCCCggg > 1:3353817/3‑101 (MQ=17)
agggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg < 2:5208637/100‑1 (MQ=18)
gggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGTAAGGA..TGGGGTTTATCTTGCCCCAAATATTCCggggg > 2:5542638/1‑101 (MQ=17)
gggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg > 2:3177246/1‑101 (MQ=18)
gggggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg < 1:2358007/101‑1 (MQ=18)
gggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCTCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCcggggtg < 2:164463/101‑3 (MQ=18)
gggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg < 1:1754682/101‑1 (MQ=25)
gggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtg < 1:3393296/101‑3 (MQ=18)
gggCCCCGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg < 1:3942700/101‑1 (MQ=21)
ggCGCTGCCCCCCTC.TTGGG.CTTCGGCCAAGTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa < 1:4327505/101‑1 (MQ=25)
ggCGCTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga > 2:1178424/1‑98 (MQ=18)
gcgcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag < 2:3114982/101‑5 (MQ=21)
cgcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgagg < 2:4543097/101‑6 (MQ=21)
gcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc > 2:341214/1‑95 (MQ=21)
gcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgcgggtgaggc > 2:4322320/1‑95 (MQ=21)
gcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTc > 1:3601608/1‑101 (MQ=25)
gcTGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTc > 2:2350610/1‑101 (MQ=25)
tGCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt > 2:684030/1‑101 (MQ=25)
gCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCCCGGTATTTTGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGCGGGGAGTCCtc > 2:3333491/1‑100 (MQ=25)
gCCCCCCTC.TT.GGCCTTCGGCCAATTCACCCCCCCAGGGATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCCGGGGGAGGCCTg > 2:609878/1‑101 (MQ=25)
ccccccTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGGATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGa > 2:4108986/1‑101 (MQ=25)
cccTC.TT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg > 2:4566733/1‑101 (MQ=37)
ccTC.TT.GGCCTTCGGAAAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATTCCGGGGGGAGTCCTGAAAgg < 1:134978/101‑1 (MQ=25)
ctc.tT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTTAAAGGa > 1:952612/1‑101 (MQ=25)
ctc.tT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa < 1:5235355/101‑1 (MQ=37)
tc.tT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc < 2:5167840/101‑1 (MQ=37)
c.tT.GGCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACg < 2:2122091/101‑1 (MQ=37)
ttggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg < 1:1039159/96‑1 (MQ=37)
ttggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg > 1:2715115/6‑101 (MQ=37)
tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 2:4207044/5‑101 (MQ=37)
tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 1:1281741/5‑101 (MQ=37)
tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 2:85464/5‑101 (MQ=37)
tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 1:1488014/5‑101 (MQ=37)
gccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggggg > 2:1477467/3‑101 (MQ=37)
ccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggggg < 2:5782305/100‑1 (MQ=37)
cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGTGAGTCCTGAAAGGACGGGGGGCaga > 1:3523901/1‑101 (MQ=37)
cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga > 1:83945/1‑101 (MQ=255)
cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga < 1:2264790/101‑1 (MQ=255)
ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag > 1:5661350/1‑101 (MQ=255)
ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag > 2:1950199/1‑101 (MQ=37)
cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc > 1:617288/1‑101 (MQ=255)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc > 1:3717657/1‑101 (MQ=37)
aaTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc > 1:4386708/1‑101 (MQ=37)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAATGACGGGGGGCAGAGccccc > 1:3248765/1‑101 (MQ=37)
aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 2:4712850/1‑101 (MQ=37)
ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc > 2:1132129/1‑101 (MQ=25)
ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc > 1:4570900/1‑101 (MQ=25)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt < 1:4815591/98‑1 (MQ=255)
accccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc > 2:5580576/2‑101 (MQ=255)
accccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc > 2:2696365/2‑101 (MQ=255)
cccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCg < 2:952536/101‑1 (MQ=255)
cccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCg < 1:2926825/101‑1 (MQ=255)
cccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCg < 1:4054548/101‑1 (MQ=255)
ccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCgg > 2:3234337/1‑101 (MQ=255)
ccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCGCGAAAGGACGGGGGGCAGAGGCCCCCTCCCGGGt > 1:4970158/1‑101 (MQ=25)
ccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGt < 1:587100/101‑1 (MQ=255)
ccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCCCCCgggc > 1:2370244/1‑100 (MQ=25)
cGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTc > 2:1638340/1‑101 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt > 1:3826016/1‑101 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt < 1:1950310/101‑1 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt > 1:160650/1‑101 (MQ=255)
ggTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCttt < 2:3857431/101‑1 (MQ=255)
gTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc > 1:1453986/1‑101 (MQ=255)
gTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc > 2:4066177/1‑101 (MQ=255)
|
GTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.GG.CTTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTC > NC_014034/2640085‑2640285
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|