BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,640,198	A→G	16.8%	intergenic (‑174/+102)	thrS ← / ← RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,640,198	0	A→G	16.8%	72.2 ‑0.4 ‑0.0	178	intergenic (‑174/+102)	thrS/RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein
Reads supporting (aligned to +/- strand): new base (15/15): ref base (81/67): total (96/82)
Fisher's exact test strand distribution p-value = 6.90e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.98e-01

Only 100 of 188 total aligned reads displayed.


GGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTT.G.G.CTTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCG  >  NC_014034/2640099‑2640297


ggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTT.GTC.CTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGa                                                                                                     <  2:3175682/101‑1 (MQ=37)


  cAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATg                                                                                                   <  1:2467963/101‑1 (MQ=25)


       gtgtCAGCCGGGGCCCTTTTGCGCAGGGAAAAGGGGGGCGCTGCCCCCCTCCT.G.GCCTTCGGGCAATTCCCCCCCCGAGGTATTTGGAGCAAGATGaaaga                                                                                              <  1:4690161/101‑3 (MQ=18)


       gtgtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaaga                                                                                              <  1:397080/101‑3 (MQ=25)


                    cgcTTTTGCGCAGGCAAAAGGGGGGGGCTGCCCCCCCCTT.G.GCCTTCGGCCAATTTACCCCCCCCGGGATTTTGAGCAAGATG.AAAGACCATGGGTTTAtt                                                                                >  1:881576/1‑100 (MQ=255)


                     gcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCt                                                                               <  1:1050008/101‑1 (MQ=25)


                          tGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCt                                                                          <  2:2800121/101‑1 (MQ=25)


                           gcgcAGGCAAAAGGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc                                                                         <  2:4815659/101‑1 (MQ=25)


                              cacgCAAAAGGGGGGCGCTGCCCCCCTCTTGG.G.CTTCGGCCCATTTACCCCCCGAGGGATTTGGGGCAAAATG.AAAGACCCTGGGTTTATTTTGCCTCaaa                                                                      >  1:3859305/4‑101 (MQ=16)


                               aGGCAAAAGGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat                                                                     <  2:4445298/101‑1 (MQ=21)


                                 gCAAAAGGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCCCCCCCCGAGGTATTTGGGGCCAGATG.AAAGACCATGGGGTTATCTTTCCTCCAatat                                                                   >  1:3396239/1‑101 (MQ=17)


                                 gCAAAAGGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat                                                                   <  1:1847421/101‑1 (MQ=21)


                                   gaaaAGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc                                                                <  1:3834882/100‑1 (MQ=17)


                                   gaaaAGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCCGGATATTTGCGGCAAGGGGAAAGGA.TGGGGGTT.ATCTTGCCCCCAATATccc                                                                >  1:2075324/2‑101 (MQ=9)


                                    aaaAGGGGGCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg                                                               <  1:4119471/101‑1 (MQ=17)


                                      aagggggCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggg                                                             <  1:2114397/99‑1 (MQ=18)


                                      aagggggCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggg                                                             >  1:1867500/3‑101 (MQ=18)


                                      aagggggCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggg                                                             >  1:1167496/3‑101 (MQ=18)


                                      aagggggCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGACCCAAATATCCCggg                                                             >  1:3353817/3‑101 (MQ=17)


                                       agggggCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg                                                            <  2:5208637/100‑1 (MQ=18)


                                        gggggCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGTAAGGA..TGGGGTTTATCTTGCCCCAAATATTCCggggg                                                           >  2:5542638/1‑101 (MQ=17)


                                          gggCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCTCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCcggggtg                                                         <  2:164463/101‑3 (MQ=18)


                                           ggCGCTGCCCCCCTCTTGG.G.CTTCGGCCAAGTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa                                                         <  1:4327505/101‑1 (MQ=25)


                                           ggCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga                                                        <  2:2299783/101‑4 (MQ=21)


                                           ggCGCTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa                                                         <  2:1184804/101‑1 (MQ=25)


                                            gcgcTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag                                                       <  2:3114982/101‑5 (MQ=21)


                                             cgcTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgagg                                                      <  2:4543097/101‑6 (MQ=21)


                                             cgcTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCCCGGTATTTTGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggggggggc                                                       >  1:1569981/1‑98 (MQ=21)


                                             cgcCGCCCCCCTC.G.G.G.CTTC.GCCAA.TCGCCCCCCGGGATATTTCGGGCAAGATGAAAGGCATCCGGTTTCATCTTGCTGCAAATATCCCGGGGGGAGTccg                                                    <  2:2060213/101‑2 (MQ=17)


                                              gcTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc                                                     >  2:341214/1‑95 (MQ=21)


                                              gcTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgcgggtgaggc                                                     >  2:4322320/1‑95 (MQ=21)


                                              gcTGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTc                                                      >  1:3601608/1‑101 (MQ=25)


                                                tGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggggaggcga                                                   >  1:1368990/1‑94 (MQ=21)


                                                tGCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt                                                    >  2:684030/1‑101 (MQ=25)


                                                 gCCCCCCTCTT.G.GCCTTCGGCCAATTCACCCCCCCCGGTATTTTGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGCGGGGAGTCCtc                                                   >  2:3333491/1‑100 (MQ=25)


                                                  ccccccTCTT.G.GCCTTTGGCCAATTCACCCCCCGAGGTATTTGGAGCCAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCtta                                                  >  1:1424258/1‑99 (MQ=25)


                                                  ccccccTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGGATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGa                                                  >  2:4108986/1‑101 (MQ=25)


                                                    ccccTCTT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa                                                >  2:597142/1‑101 (MQ=37)


                                                       ctctT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTTAAAGGa                                             >  1:952612/1‑101 (MQ=25)


                                                       ctctT.G.GCCTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa                                             >  2:4410668/1‑101 (MQ=37)


                                                            ttggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg                                          >  2:2135986/6‑101 (MQ=37)


                                                            ttggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg                                          >  1:2715115/6‑101 (MQ=37)


                                                            ttggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg                                          <  1:1039159/96‑1 (MQ=37)


                                                             tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                                         >  2:4207044/5‑101 (MQ=37)


                                                             tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                                         >  2:85464/5‑101 (MQ=37)


                                                             tggccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg                                         >  1:1281741/5‑101 (MQ=37)


                                                              ggccTTCGGCCAATTC.ACCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggggg                                       <  2:4560970/98‑1 (MQ=25)


                                                               gccTTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggggg                                       >  2:1477467/3‑101 (MQ=37)


                                                                    cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGTGAGTCCTGAAAGGACGGGGGGCaga                                  >  1:3523901/1‑101 (MQ=37)


                                                                    cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga                                  >  1:83945/1‑101 (MQ=255)


                                                                    cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga                                  <  1:1533075/101‑1 (MQ=255)


                                                                    cGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga                                  <  1:2264790/101‑1 (MQ=255)


                                                                     ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag                                 >  1:5661350/1‑101 (MQ=255)


                                                                     ggCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag                                 >  2:1950199/1‑101 (MQ=37)


                                                                       ccAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc                               >  1:3694064/1‑101 (MQ=37)


                                                                        cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc                              >  1:617288/1‑101 (MQ=255)


                                                                        cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc                              >  1:3734828/1‑101 (MQ=37)


                                                                        cAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc                              >  1:29023/1‑101 (MQ=37)


                                                                          aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAATGACGGGGGGCAGAGccccc                            >  1:3248765/1‑101 (MQ=37)


                                                                          aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc                            >  2:3229352/1‑101 (MQ=37)


                                                                          aTTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc                            >  2:4712850/1‑101 (MQ=37)


                                                                           ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc                           >  2:1132129/1‑101 (MQ=25)


                                                                           ttCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccccc                           >  1:4694849/1‑101 (MQ=25)


                                                                            tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt                          <  1:4815591/98‑1 (MQ=255)


                                                                            tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt                          >  2:5239715/4‑101 (MQ=25)


                                                                             caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc                         >  2:3078918/3‑101 (MQ=255)


                                                                              accccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc                        >  2:5034044/2‑101 (MQ=255)


                                                                              accccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc                        >  2:2696365/2‑101 (MQ=255)


                                                                              accccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc                        <  1:4397032/100‑1 (MQ=255)


                                                                               ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc                       <  1:176/101‑1 (MQ=255)


                                                                                cccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCg                      <  2:952536/101‑1 (MQ=255)


                                                                                cccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCg                      >  2:4060306/1‑101 (MQ=255)


                                                                                cccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCg                      <  1:4054548/101‑1 (MQ=255)


                                                                                 ccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCgg                     >  2:3234337/1‑101 (MQ=255)


                                                                                   ccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCGCGAAAGGACGGGGGGCAGAGGCCCCCTCCCGGGt                   >  1:4970158/1‑101 (MQ=25)


                                                                                   ccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCCCCCgggc                   >  1:2370244/1‑100 (MQ=25)


                                                                                     gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt                 >  2:1697365/1‑101 (MQ=255)


                                                                                     gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt                 <  1:1950310/101‑1 (MQ=255)


                                                                                     gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt                 <  1:4441108/101‑1 (MQ=255)


                                                                                     gAGGTATTTGGAGAAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt                 <  2:5661055/101‑1 (MQ=255)


                                                                                      aGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt                >  1:160650/1‑101 (MQ=255)


                                                                                        gTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc              <  2:1569887/101‑1 (MQ=255)


                                                                                          aTTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc            >  2:3419261/1‑101 (MQ=255)


                                                                                          aTTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc            >  2:4813970/1‑101 (MQ=255)


                                                                                           tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa           <  2:2414969/101‑1 (MQ=255)


                                                                                           tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa           <  1:4170348/101‑1 (MQ=255)


                                                                                           tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa           <  1:57083/101‑1 (MQ=255)


                                                                                           tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa           <  2:3717429/101‑1 (MQ=255)


                                                                                           tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa           >  2:3628615/1‑101 (MQ=255)


                                                                                           tttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCa           <  1:1477560/101‑1 (MQ=255)


                                                                                            ttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa          <  1:4567009/101‑1 (MQ=255)


                                                                                            ttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa          >  1:4063216/1‑101 (MQ=255)


                                                                                             tGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAg         <  2:3892420/101‑1 (MQ=255)


                                                                                             tGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAg         >  1:5784336/1‑101 (MQ=255)


                                                                                              ggAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc        >  1:2249088/1‑101 (MQ=255)


                                                                                               gagcAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCg       <  2:881500/98‑1 (MQ=255)


                                                                                                  cAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc    >  2:3863652/1‑101 (MQ=255)


                                                                                                   aaGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTcc   >  1:5376445/1‑101 (MQ=255)


                                                                                                   aaGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGCCTTTCTCAAGCGTTcc   >  2:1409480/1‑101 (MQ=255)


                                                                                                    aGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCg  <  1:2994544/101‑1 (MQ=255)


GGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTCTT.G.G.CTTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCCG  >  NC_014034/2640099‑2640297

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG