| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,068,128 | C→T | 1.9% | intergenic (‑111/+181) | glcD ← / ← RCAP_rcc02872 | glycolate dehydrogenase, subunit GlcD/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,068,128 | 0 | C→T | 1.9% | 4.0 ‑2.6 ‑0.8 | 258 | intergenic (‑111/+181) | glcD/RCAP_rcc02872 | glycolate dehydrogenase, subunit GlcD/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/0): ref base (144/109): total (149/109) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.52e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.55e-01 | ||||||||||
Only 100 of 286 total aligned reads displayed.
TCCGCTCCGGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCC > NC_014034/3068028‑3068228
|
tccgctccgGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGc > 1:4755822/1‑101 (MQ=255)
tccgctccgGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGc < 2:2845817/101‑1 (MQ=255)
ccgctccgGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGcc > 2:5423702/1‑101 (MQ=255)
gctccgGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTc < 2:95710/101‑1 (MQ=255)
ctccgGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCg < 2:466842/101‑1 (MQ=255)
tccgGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTcag > 1:1984871/1‑99 (MQ=255)
tccgGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGt < 2:5152716/101‑1 (MQ=255)
cgGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGa > 1:1349283/1‑101 (MQ=255)
cgGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGa < 1:3404178/101‑1 (MQ=255)
gTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGAcc < 1:1747054/101‑1 (MQ=255)
tCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGAccg < 1:1141144/101‑1 (MQ=255)
cAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGAccgc > 1:2839014/1‑101 (MQ=255)
aaaaGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGAccgcc < 1:839672/101‑1 (MQ=255)
aaGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGa > 2:2920079/1‑101 (MQ=255)
atttATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAg > 1:93095/3‑101 (MQ=255)
aGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAg > 2:887620/1‑101 (MQ=255)
gTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAgg < 2:2117201/101‑1 (MQ=255)
ttATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAggg > 2:1244962/1‑101 (MQ=255)
tATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGc < 2:838503/101‑1 (MQ=255)
gACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCa > 1:4264047/1‑101 (MQ=255)
ccAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCaaa < 1:96641/101‑1 (MQ=255)
ccAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCaaa < 1:1818532/101‑1 (MQ=255)
cAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAg > 2:375469/1‑101 (MQ=255)
cAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGAGGAACAGTGGCCTCGGGACCGCCGAGGGCCCAAAg > 1:2553199/1‑101 (MQ=255)
aaTTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAgg > 2:3027969/1‑101 (MQ=255)
aaTTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAgg < 1:1883385/101‑1 (MQ=255)
aTTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGc > 2:3948252/1‑101 (MQ=255)
ttttGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGcc > 1:2308998/1‑101 (MQ=255)
tttGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCACAGGacc > 2:2298015/1‑101 (MQ=255)
ttGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTTACCGCCGAGGGCCCAAAGGCCCt > 1:1109281/1‑101 (MQ=255)
tGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTc > 1:598058/1‑101 (MQ=255)
gCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCg > 1:4015016/1‑101 (MQ=255)
gCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCg < 2:3595052/101‑1 (MQ=255)
cGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCgg < 2:3118586/101‑1 (MQ=255)
ggATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGc < 2:5603297/101‑1 (MQ=255)
ggATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGc < 1:3071784/101‑1 (MQ=255)
taTTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCCGcc < 2:1364425/100‑1 (MQ=255)
gATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGcc > 2:685171/1‑101 (MQ=255)
gATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGcc > 2:327272/1‑101 (MQ=255)
aTTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCa < 1:4363948/101‑1 (MQ=255)
aTTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCa > 1:3285449/1‑101 (MQ=255)
aTTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCa < 1:245229/101‑1 (MQ=255)
aTTCGCGCAACCGAAACGATGGGCAGGCTCACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCa < 1:5622481/101‑1 (MQ=255)
ttCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAg < 1:5391163/101‑1 (MQ=255)
tCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAgc < 1:2920246/101‑1 (MQ=255)
cgcAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCGCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGcgcc < 2:1651625/101‑1 (MQ=255)
gcAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGcgccc > 1:2213007/1‑101 (MQ=255)
aCCGAAACGATGGGCGGGCTGACGGAGGCCACCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGcgcccgcc < 2:4357971/101‑1 (MQ=255)
cGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGcccgcccc < 2:4038230/101‑1 (MQ=255)
cGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGcccgcccc < 1:407414/101‑1 (MQ=255)
cGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGcccgcccc > 1:4985559/1‑101 (MQ=255)
gAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGcccgccccg > 1:4853640/1‑101 (MQ=255)
gAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGccccccccc > 2:3415547/1‑100 (MQ=255)
aaaCGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGcccgccccgc > 2:1285526/1‑101 (MQ=255)
aaCGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCccgccccgcc < 1:4819645/101‑1 (MQ=255)
cGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCa > 1:5311656/1‑101 (MQ=255)
aTGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATg > 1:4105731/1‑101 (MQ=255)
gggCAGGCTGACCGAGGCCATCGCCGAGATCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggc > 1:5772253/1‑101 (MQ=255)
ggCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggcg > 2:4789760/1‑101 (MQ=255)
gCAGGCTGACCGAAGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATggcgg < 1:4636508/101‑1 (MQ=255)
cAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCCCCCCGCCCATggcggg > 1:1467807/1‑101 (MQ=255)
aGGATGACCGAGGCCATCGACGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGGCAGTGGCCGACCCGCCCATggcgggt > 2:1856906/1‑100 (MQ=17)
gCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCCCCCCGCCCATGGCGGgcgc > 2:445545/1‑101 (MQ=255)
cTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.t > 1:358840/1‑101 (MQ=255)
tGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGC.tc > 2:3678594/1‑100 (MQ=255)
tGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.tt > 1:2314288/1‑101 (MQ=255)
tGACCGAGGCCACCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.tt < 2:1936649/101‑1 (MQ=255)
aCCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGCCCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.Ttct < 1:3244653/101‑1 (MQ=255)
aCCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.Ttct < 1:5571657/101‑1 (MQ=255)
aCCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.Ttct < 1:5081035/101‑1 (MQ=255)
ggAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTcg < 2:2001368/100‑1 (MQ=255)
cGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTcg > 2:3178540/1‑101 (MQ=255)
cGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTcg < 1:1618111/101‑1 (MQ=255)
gAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTcgc > 2:3257116/1‑101 (MQ=255)
aGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTcccc > 2:5473772/1‑101 (MQ=255)
aGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.CTCTcgcc > 2:2505128/1‑101 (MQ=255)
ggCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTcgccc < 1:1768875/101‑1 (MQ=255)
cATCGCCGAGGTCATGCGGACCAGAAGTCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGC.CGCCcgcccccc > 1:2170258/1‑101 (MQ=21)
cATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTcgccctcc > 1:3898994/1‑101 (MQ=255)
aTCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCCTGGCGGGCGC.TTCTCGCcccccg > 2:2208730/1‑101 (MQ=255)
gCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCgggg < 2:5618311/101‑1 (MQ=255)
gCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCCCCCCCCCCcggg > 1:1025356/1‑101 (MQ=18)
gAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGgggcgg > 2:4199194/1‑101 (MQ=255)
aGGTCAGGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGgggcggg < 2:1071528/101‑1 (MQ=255)
ggTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGgggcgggc < 2:584898/101‑1 (MQ=255)
ggTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGgggcgggc < 2:4094746/101‑1 (MQ=255)
gTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGgggcggggg > 2:2606145/1‑99 (MQ=255)
tCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGGCGGgcgc > 2:1551540/1‑101 (MQ=255)
cATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGGCGGGCGcc < 1:3803528/101‑1 (MQ=255)
aggCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCg < 2:1170126/99‑1 (MQ=255)
aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCg < 2:1730669/101‑1 (MQ=255)
aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCg < 2:4279462/101‑1 (MQ=255)
aTGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCCGGGCGGGGGCCg > 1:4549315/1‑101 (MQ=255)
gaCAATGGCCCCGTGACCGGCGAGGGCCCAAAGGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGCGGTCGGGCCCCCCGGGGGGGGGGCGgggccc > 1:4459172/2‑97 (MQ=17)
aaCAGCGGTCCCGTGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGC.TTTTTCCCCCCCCGGGGGGGGGCCgcgcccc > 2:4405969/1‑95 (MQ=11)
acggcggCCTCGGTGCCGACGAGGCCCCAACGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTctg < 2:905885/96‑1 (MQ=11)
aGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGG.TTCGCGCCCGCCAGGGACGGCGCCGGCCCccgct > 2:269465/1‑101 (MQ=14)
aGTGCCCTCGTGCCCGCGGGGGGCCCAAGGGCCCTCGGCCAGCGCCCGCCCCGCCCAGGGCGGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTctgct < 2:5064443/101‑1 (MQ=14)
tGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGGCGGGGGGCGGcccccgccgc > 1:1263018/1‑93 (MQ=14)
ccTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCCGGCTCCGCTGCGcc > 2:4837160/1‑101 (MQ=255)
|
TCCGCTCCGGTCAAAAGTTATGACCAATTTTGCGGATTCGCGCAACCGAAACGATGGGCAGGCTGACCGAGGCCATCGCCGAGGTCATGCGGAACAGTGGCCTCGTGACCGCCGAGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGCTGCGCC > NC_014034/3068028‑3068228
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|