BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	3,178,417	G→C	3.1%	intergenic (+156/+91)	RCAP_rcc02987 → / ← RCAP_rcc02988	OmpA/MotB domain‑containing protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	3,178,417	0	G→C	3.1%	3.8 ‑1.8 ‑0.0	193	intergenic (+156/+91)	RCAP_rcc02987/RCAP_rcc02988	OmpA/MotB domain‑containing protein/hypothetical protein
Reads supporting (aligned to +/- strand): new base (3/3): ref base (45/142): total (48/145)
Fisher's exact test strand distribution p-value = 1.64e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.61e-01

Only 100 of 228 total aligned reads displayed.


CGGCATTGGCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCGCTCAGGCCGCC  >  NC_014034/3178317‑3178517


 gccATTGCCCCCATGCCAGCGGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCtgt                                                                                                           <  2:77123/99‑1 (MQ=255)


  gCACTGGCCCCATGCCCGCCGGGGGCCCAAAGGCCGCCGGCCAGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCtgtg                                                                                                          <  2:1750762/101‑1 (MQ=255)


     tgggCCCCATGCCGGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTcg                                                                                                       <  1:4116107/99‑1 (MQ=255)


      tgcccacggcccAGCGGGGGGCCGAAGGGCCGCCGGCAGGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTcgc                                                                                                      <  2:2451573/91‑1 (MQ=14)


      tGGCCCCATGCCAGCCGGGGCCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTcgc                                                                                                      <  2:1550485/101‑1 (MQ=255)


      ggcccccAGCCCGGCGGGGGGCCCAAGGGCCCCCGGCCGGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTcgc                                                                                                      <  1:3951048/98‑1 (MQ=14)


       ggCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCCCCCGCCCCGCCGGGCGGCCGCCCGGGTcgcg                                                                                                     >  1:4746086/1‑101 (MQ=17)


          ccctgcccAGCCGGGGGCCCAAGGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.tt                                                                                                <  2:4686520/95‑1 (MQ=255)


          cccATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.tt                                                                                                <  2:3368475/101‑1 (MQ=255)


          cccATGCCAGCCGGGGGCCCAAAGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.tt                                                                                                <  1:5500959/101‑1 (MQ=255)


           ccATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTg                                                                                               <  1:165509/101‑1 (MQ=255)


            cgtGCCGGCGGGGGGCCAAAAGGCCGCGGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGGG.C.TTg.g                                                                                             <  2:5504718/99‑1 (MQ=17)


             ctGCCAGCCGGGGGCCCAAAGGCCGCCGCCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTg.gg                                                                                            <  1:4430824/100‑1 (MQ=255)


               gCCGGCCTGGTGCCAAAGGCCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGTCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGa                                                                                          <  2:5448549/101‑1 (MQ=14)


               gCCAGCGGGGGGCCCAAGGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGa                                                                                          <  1:1127960/101‑1 (MQ=255)


               gCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGC.CTCTCGCCCCCCCGGCCGGGGGGGCGCCCGTGTCGCT.CGTTg.ggg                                                                                           >  2:951661/1‑101 (MQ=14)


                 cAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.CTCTCGCCCCCCGGGGCGGGCGGCGGCCCGGGGCGCG.C.GTG.GGGgaa                                                                                        >  1:398828/1‑101 (MQ=14)


                  aGCGGGGGGCCGAAAGGCCGCCGGCCAGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAAc                                                                                       <  2:2473098/101‑1 (MQ=255)


                  aGCGGGGGGCCCAAAGGCCGCCGGCCGGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAAc                                                                                       <  2:2911271/101‑1 (MQ=255)


                    ccGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGC.TTCTCGCCCGCCGGGCCGGGCGGCGGCCCGGGTCGCG.C.CTG.GGGGAAAgg                                                                                     >  1:2150073/1‑101 (MQ=14)


                      cggggCCCAAAGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGC.CTCTCCCCCCCCCGGCCGGGGGCCGGCCCCTGTCACGCC.TTG.GGGCACCggc                                                                                    >  1:2017901/2‑100 (MQ=14)


                       gggcCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCt                                                                                  <  2:3074044/101‑1 (MQ=255)


                        gggCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGGGC.GTCTCGCCCCCCCGGCCGGGCGCCGGGCCGCGGCGCG.G.TGg.ggggggcggcgtt                                                                                 >  1:2641525/1‑91 (MQ=2)


                        gggCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCtt                                                                                 <  1:4523664/101‑1 (MQ=255)


                         ggCCCAAGGCCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTg                                                                                <  2:2092669/101‑1 (MQ=255)


                         ggCCCAAAGCCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTg                                                                                <  2:1726123/101‑1 (MQ=255)


                          gCCCAAGGGCCGCCGCCCAGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGc                                                                               <  2:1051421/101‑1 (MQ=255)


                           cccAAGGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGcc                                                                              <  1:2459820/101‑1 (MQ=255)


                            ccAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGTCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCa                                                                             <  2:425246/101‑1 (MQ=255)


                             cAAGGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCAc                                                                            <  2:728431/101‑1 (MQ=255)


                             cAAAGGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCAc                                                                            <  1:349030/101‑1 (MQ=255)


                                 gccccccgGCCGGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGc                                                                        <  1:1209254/96‑1 (MQ=255)


                                   cgtgcgcccggcgcCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCt                                                                      <  2:4878715/91‑1 (MQ=255)


                                   ccgccgGCCAGCGCCCGCCCCGCCCATGGCGGGGGC.GTCTCCCCCCCCCGGCCGGGCGGCGGCCTGTGTGGCG.C.TTG.GGGGGAAGGGCTTGCCCCCGGccc                                                                      >  2:215830/1‑100 (MQ=9)


                                     ctcgGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCCCCGGGGCAGGCGCCGGCCTCCGTTGCG.C.CTGCTCGAAACGGGGTCGCCACGGGcgct                                                                     >  1:866492/3‑98 (MQ=14)


                                      ccgGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GCAAAACGGTCTTGCCACGGTCGTTGc                                                                   <  2:173044/101‑1 (MQ=17)


                                      ccgCCCAGCGCCCGCCCCGCCGATGGCGGGCGC.TTTTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGc                                                                   <  2:3659303/101‑1 (MQ=255)


                                       cgGCCAGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGca                                                                  <  1:2520464/101‑1 (MQ=255)


                                         gCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGcaca                                                                <  1:3163281/101‑1 (MQ=255)


                                          ccAGCCCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAg                                                               <  1:2869035/101‑1 (MQ=255)


                                             gcgcCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAggcg                                                            <  2:3164891/101‑1 (MQ=255)


                                              cccccgccccgcCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAggcgg                                                           <  2:4588738/99‑1 (MQ=255)


                                               gcccgcccCGCCCATGGCGGGGGC.TTCTCGCCCCCCCCGCCGGGCGGCGGCCCGGGTCGCG.C.TTT.GGGGGACGGGCGTGCCACGGGCCTTGCACCagcggg                                                          >  2:3213073/1‑101 (MQ=12)


                                               gcccgcccCGCCCATGGCGGGCGCATTCGCGCCGCCGGGGCGGGGCGCAGGCCTCCCGCGCG.C.TTG.GGGAGGCGATCTTGTCACCGGCTTTggtgcggcgg                                                           >  2:1819880/1‑92 (MQ=18)


                                               ccccgccccgcCCGTGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAggcggg                                                          <  1:1411328/100‑1 (MQ=255)


                                               ccccgccccgcCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAggcggg                                                          <  1:1514958/100‑1 (MQ=255)


                                                 ccgccccgccCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAggcgggcg                                                        <  1:2849015/101‑1 (MQ=255)


                                                  cgccccgcccATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACCGGCCTTGCCCCGgcgggcgg                                                       >  2:5307330/1‑101 (MQ=255)


                                                   gccccgcccATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGcgggcggg                                                      <  1:5665064/101‑1 (MQ=255)


                                                    ccccgccgATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGa                                                     <  2:3982803/101‑1 (MQ=255)


                                                     cccgcccATGGCGGGCGC.TTCTCGCCCGCCGGACCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGaa                                                    <  2:4540784/101‑1 (MQ=255)


                                                      ccgcccATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGaaa                                                   <  1:930647/101‑1 (MQ=255)


                                                       cgcccATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAAc                                                  <  1:5307620/101‑1 (MQ=255)


                                                           cATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCgg                                              <  1:3675664/101‑1 (MQ=255)


                                                            aTGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGa                                             <  2:4777771/101‑1 (MQ=255)


                                                             gggcgggcgC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGAt                                            <  2:5057960/100‑1 (MQ=255)


                                                              ggcgggcgC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATc                                           <  1:387187/101‑1 (MQ=255)


                                                                cgggcgC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGgaaaacggggcgc                                         >  2:3751364/1‑91 (MQ=21)


                                                                 gggcgC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATc.g.c.g                                     <  2:1133951/101‑1 (MQ=255)


                                                                  ggcgC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAACGCGGGGc.g.c.gg                                    >  1:741804/1‑100 (MQ=25)


                                                                  ggcgC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAAGCGGGGc.g.c.gg                                    >  2:5734791/1‑100 (MQ=21)


                                                                    cgc.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACCGGCGGGCGGGCAAACCGGGTC.G.T.Gttt                                  >  2:167013/1‑101 (MQ=21)


                                                                    cgc.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.Gttt                                  <  1:3833037/101‑1 (MQ=255)


                                                                     gc.TTCTCGCCCGTCGGCCCGGTCTTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTc                                 <  2:2508518/101‑1 (MQ=25)


                                                                     gc.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAACGCGGGTc.gaggttt                                   >  2:924856/1‑95 (MQ=25)


                                                                      c.TTCTCGCCCGGCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTcc                                <  2:2615400/101‑1 (MQ=255)


                                                                        ttCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAGCCGGGGC.G.C.GTTTTCt                               >  1:1742216/1‑101 (MQ=25)


                                                                        ttCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCt                               <  2:717277/101‑1 (MQ=255)


                                                                        ttCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCt                               <  1:3317679/101‑1 (MQ=255)


                                                                          ctcGCCCGCCGGGCGGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAACGCGGGTG.C.C.GGTTCCttt                             >  2:3574913/1‑101 (MQ=37)


                                                                            cgcccgccGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAAGGGGGTC.G.G.GGTTTCttttt                           >  1:1676291/1‑100 (MQ=21)


                                                                            cgcccgccGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTc                           <  2:2358745/101‑1 (MQ=255)


                                                                             gcccgccGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGGAAGCGGGGCGG.C.GTTTCTTTTTc                           >  1:1684443/1‑101 (MQ=25)


                                                                             gcccgccGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGGAAGCGGGGC.G.C.GGTTTCTTTTct                          >  1:615433/1‑100 (MQ=25)


                                                                             gcccgccGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCg                          <  1:2362344/101‑1 (MQ=255)


                                                                               ccgccgGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAAGCGGATC.G.C.GGTTCCttttttcc                        >  1:535187/1‑97 (MQ=37)


                                                                               ccgccgGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGcc                        <  1:215863/101‑1 (MQ=255)


                                                                               ccgccgGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGcc                        <  2:5209807/101‑1 (MQ=255)


                                                                                cgccgGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGccc                       <  1:3721165/101‑1 (MQ=255)


                                                                                cgccgGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGccc                       <  1:996202/101‑1 (MQ=255)


                                                                                 gccgggccggGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACCCGGATC.G.C.GTTTCCTTTTCGCCCg                      <  2:991005/101‑1 (MQ=255)


                                                                                    gggccgggcGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGaaa                   <  2:3909617/101‑1 (MQ=255)


                                                                                    gggccgggcGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGaaa                   <  2:5335280/101‑1 (MQ=255)


                                                                                      gccgggcGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAAcc                 <  1:2560767/101‑1 (MQ=255)


                                                                                      gccgggcGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAAcc                 <  2:3421305/101‑1 (MQ=255)


                                                                                       ccgggcGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGCGGGAACGCCGAGG.G.C.GGGTTCTTTTAGCCCGAAAcaa                >  2:4147801/1‑99 (MQ=25)


                                                                                       ccgggcGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCg                <  1:3121935/101‑1 (MQ=255)


                                                                                       ccgggcGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCATTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCg                <  1:4721255/101‑1 (MQ=255)


                                                                                        cgggcGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAACGCGGGAC.G.C.GGTTTCTTTTTTCCCCGAACCgg               >  2:4061141/1‑100 (MQ=25)


                                                                                         gggcGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAAAGCCGGTG.GCC.GTTTCTTTTTTCCCGCAAACCgc               >  2:17053/1‑100 (MQ=19)


                                                                                           gcGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCGc            <  2:5269157/101‑1 (MQ=255)


                                                                                            cGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCGCt           <  2:1419732/101‑1 (MQ=255)


                                                                                            cGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCGCt           <  2:4648943/101‑1 (MQ=255)


                                                                                             gTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAACGCGGGGC.G.C.GGTTTCTTTTTGCCCCCAACCGGCGccc          >  2:4344843/1‑99 (MQ=25)


                                                                                              tCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAACGCGGATC.G.C.GGGTTCTTTTTTTCCGACACCCTCGcgcc         >  2:2972656/1‑98 (MQ=25)


                                                                                              tCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAGAAGCGGGGC.G.CGGTTTCTTTTTCCCCCCAAAccccccccc          >  1:3066902/1‑94 (MQ=25)


                                                                                               cGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAAAGCGGATC.G.C.GCTTCCTTTTTGCCCGAAACCGCCGCTccc        >  2:5787799/1‑99 (MQ=37)


                                                                                                   cTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGGAACGGGGGTC.G.C.GTTTTCTTTTTGCCCGGAACCGTGGCCCAgggcc    >  1:3624587/1‑98 (MQ=37)


                                                                                                   cTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCGCTCAGgccg    <  1:3432629/101‑1 (MQ=255)


                                                                                                     gtgtCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGGGGGGAACGCGGAGC.G.C.GGTTCCCTTTCGCCCCAAACCGTCGCCCAGgccgcc  >  2:2814169/1‑101 (MQ=255)


CGGCATTGGCCCCATGCCAGCCGGGGGCCCAAAGGCCGCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGC.TTCTCGCCCGCCGGGCCGGGCGTCGGCCTGTGTCGCG.C.TTG.GGGAAACGGTCTTGCCACGGGCCTTGCACAGGCGGGCGGGAAACGCGGATC.G.C.GTTTCCTTTTCGCCCGAAACCGTCGCTCAGGCCGCC  >  NC_014034/3178317‑3178517

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG