| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,439,829 | T→G | 4.3% | intergenic (‑132/+31) | RCAP_rcc03240 ← / ← mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,439,829 | 0 | T→G | 4.3% | 8.0 ‑3.0 ‑0.0 | 174 | intergenic (‑132/+31) | RCAP_rcc03240/mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Reads supporting (aligned to +/- strand): new base (4/4): ref base (134/30): total (139/35) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.99e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.86e-01 | ||||||||||
Only 100 of 207 total aligned reads displayed.
CGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCC > NC_014034/3439729‑3439929
|
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGt < 1:5525741/101‑1 (MQ=255)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTg < 1:3772225/101‑1 (MQ=255)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTg < 1:3267228/101‑1 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..g < 1:5790582/101‑1 (MQ=255)
gACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..gg.g < 1:5763491/101‑1 (MQ=255)
aCAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGGAAGATAAAGGGGGTTTGG.TTTTTTTTT.TTCCCACATATACCCGGGGGGC..gg.gg > 1:5153494/1‑101 (MQ=255)
cAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGGAAGATAAAGGGGGTTTGC.TTTTTTTTT.TTCCCCAATATCCCGGGGGGGC..gg.ggg > 1:863844/1‑101 (MQ=255)
aGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGAATTTGGGGGAAGATAAAGGGGGTTTGC.TTTTTTCTT.TCCCCAAATATCCCGGGGGGGC..GG.GGGc > 1:5432536/1‑101 (MQ=38)
aGGAATCCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGc < 2:1758545/101‑1 (MQ=255)
aGGAATCCGGCCTGCGGCCGATCCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGTTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGc < 1:1354403/101‑1 (MQ=255)
ggAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGGAAGAAAAAAGGGGGTTGC.TTTTTTTTT.TTCCCAAATATCCCCGGGGGGG..gg.ggggg > 1:3975066/1‑99 (MQ=255)
ggAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCa < 1:115614/101‑1 (MQ=255)
aaTTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCaga < 1:263735/101‑1 (MQ=255)
aTTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCagag < 2:4305019/101‑1 (MQ=255)
ttCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTTGGGCAAGATAAAGGGGCTTTTC.TTTTTTCTT.TTCCCCAATATCCCCGGGGTGG..gg.ggggcgagg > 2:408253/1‑95 (MQ=25)
tCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGcc < 2:1735106/101‑1 (MQ=255)
ggCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTTGGGGAAGATAAAAGGGGTTTGCTTTTTTTTTT.TCCCCAAAATTCCCGGGGGGGG..gg.gggggggcccc > 1:1038372/1‑93 (MQ=255)
ggCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGGAAGATAAAAGGGGTTTGC.TTTTTTCTT.TCCCCAAATATCCCGGGGGGGC..GG.GGGGAGGGgccc > 1:3526358/1‑101 (MQ=25)
gCCTGCGGCCGATGCCTCCGGC.GGGGGTATTTGGGGGAAGAAAAAGGGGGTTTGC.TTTTTTTTT.TCCCCCAATATCCCCGGGGTGG..GG.GGGGCGAGccccc > 2:5699797/1‑101 (MQ=25)
gCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGccccc < 2:518088/101‑1 (MQ=255)
cTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGGAAGATAAAAGGGGTTTGC.TTTTTTCTT.TCCCCCAATATCCCCGGGGGGC..GG.GGGCAGAGccccccc > 2:5355924/1‑99 (MQ=25)
cTGCGGCCGATCCCTCCGGC.GGGTATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGACCCCCcgc < 2:5404681/101‑1 (MQ=255)
tGCGGCCGATGCCTCCGGC.GGGGGGATTTGGGGGAAGATAAAAGGGGTTTGC.TTTTTTTTT.TTCCCAAAAATCCCCGGGGGGC..GG.GGGGAGAGcccccccc > 1:5569831/1‑98 (MQ=255)
ctttcGATGCCTCCGGC.GGGGATATTTGGGGCAAGATGAA.GCCCATCCC.TTTAATCTT.GCCCCAAATATCCCGGGGGACCCGGG.GGGCAGCGccccccgcc < 2:1873158/97‑5 (MQ=21)
ggCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGGTTTGC.TTTTATCTT.TCCCCAAAAATCCCGGGGGGGC..GG.GGGGAGAGCCCCcgccgcc > 2:760795/1‑97 (MQ=25)
ttcGATGCCTCCGGC.GGGGATATTTTGGGCAAGATGAA.AACCATCCC.CTTCATCTT.GCCCCCAATATCCCGGGGGGCCCGGG.GGGCAGCGcccccccccac > 2:690298/3‑95 (MQ=21)
cGATGCCTCCGGC.GGGGATATTTTGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGGGC..GG.GGGGAGAGCCCCcgccgccccg > 1:2529079/1‑94 (MQ=21)
cGATGCCTCCGGC.GGGGAAATTTTGGGCAAGATAAAGGGGGTTTTG.TTTTATCTT.TCCCCAAATATCCCGGGGGGGC..GG.GGGCAGAGCCCCcgccgccacg > 2:5531468/1‑94 (MQ=21)
gATGCCTCCGGCGGGGGAATTTTTGGGGAAAAAAAAGGGGGTTTTT.TTTTTTTTT.TCCCCAAAAATCCCGGGGGGGG..GG.GGGGGGGGcccccccccccccg > 2:1978605/1‑92 (MQ=255)
aTGCCTCCGGC.GGGGATATTTGGGGAAAGATAAAGGGGCCTTGG.TTTTATTTT.TTCCCCAATAAGCCGGGGGGGA..GG.AGGGAGAGCCCCcgccgctacggt > 2:5728584/1‑92 (MQ=16)
cTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCAc > 2:1537611/1‑101 (MQ=255)
gc.ggGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCAcgccgc > 1:5236214/1‑101 (MQ=255)
c.ggGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCcgcg > 2:1659115/1‑101 (MQ=255)
c.ggGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCcgcg > 1:5653020/1‑101 (MQ=255)
ggggATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGa > 1:448850/1‑101 (MQ=255)
ggggATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGa > 2:4969395/1‑101 (MQ=255)
ggggATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGa > 2:3731427/1‑101 (MQ=255)
gggATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGAc > 1:5213294/1‑101 (MQ=255)
tatTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtc > 2:1689208/1‑101 (MQ=255)
atTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtct > 2:2759915/1‑101 (MQ=255)
atTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtct > 2:4321621/1‑101 (MQ=255)
tttGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtctc > 2:5059598/1‑101 (MQ=255)
tttGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtctc > 1:48469/1‑101 (MQ=255)
tGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTACg > 2:462307/1‑101 (MQ=255)
gggaaaaaaaaGGGGTCTTGT.TTTTTTTTT.TCCCCAAA.ATCCCCGGGGGGT..GG.GGGGGAAGACCCCCAGCCGCCACGGTTCACGCCGCGACCGTCTCCggg < 1:1939306/93‑1 (MQ=255)
aaGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg > 2:3655222/1‑101 (MQ=255)
aaGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg > 1:2337035/1‑101 (MQ=255)
aaGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg > 2:101627/1‑101 (MQ=255)
aaGATAAAGGGGCTTTGC.TTTGATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGCCg > 1:4257028/1‑101 (MQ=21)
aaaatgaGGGGTTTTTC.TTTTTTATC.TCCCCAAAATTCGGGGGGGGGT..GG.GGGGCCGCCCCCCCCCCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTc < 2:1503082/95‑1 (MQ=255)
gATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc > 2:4418412/1‑101 (MQ=255)
aTAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 1:5511108/1‑101 (MQ=255)
aTAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa > 2:2249024/1‑101 (MQ=255)
tAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCGCGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg > 1:4965843/1‑101 (MQ=255)
aaaGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc > 1:1743843/1‑101 (MQ=255)
aGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc > 2:587516/1‑101 (MQ=255)
gggCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcga > 1:336316/1‑101 (MQ=255)
gggCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcga > 1:1651199/1‑101 (MQ=255)
ggtgtttttttttTTCTTCTCCCCAAATGGGCGGGGGGGGG..GG.GGGGCCCGCCCCCCCCCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcg < 2:3017027/92‑1 (MQ=255)
gctttgc.tttTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcgacg > 1:2265969/1‑101 (MQ=255)
tttgc.tttTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGat > 1:5105610/1‑101 (MQ=255)
tttgc.tttTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGat > 2:2535728/1‑101 (MQ=255)
tttgc.tttTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGat > 1:1773478/1‑101 (MQ=255)
ttgc.tttTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGata > 1:284711/1‑101 (MQ=255)
tgc.tttTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGatat > 1:3032641/1‑101 (MQ=255)
c.tttTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATcc > 2:1165281/1‑101 (MQ=255)
ttttATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCca > 2:3475876/1‑101 (MQ=255)
ttttATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCca > 2:3294329/1‑101 (MQ=255)
ttttATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCca > 2:2816029/1‑101 (MQ=255)
ttttATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGCCGCCAGCGCGACGATATCca > 1:708658/1‑101 (MQ=255)
ttttATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGGTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCca > 1:1494306/1‑101 (MQ=255)
tttATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcat > 2:345877/1‑101 (MQ=255)
ttATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatc > 1:838518/1‑101 (MQ=255)
aTCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatcat > 2:1064930/1‑101 (MQ=255)
tCTT.TCTCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATg > 2:1389468/1‑101 (MQ=255)
cTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCCTGa > 1:1276154/1‑101 (MQ=255)
cTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGa > 2:3526280/1‑101 (MQ=255)
cTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGa > 2:2433758/1‑101 (MQ=255)
cTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGa > 1:4452202/1‑101 (MQ=255)
tt.tCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGAt > 1:4308659/1‑101 (MQ=255)
tt.tCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGAt > 1:2112225/1‑101 (MQ=255)
t.tCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATc > 1:4650545/1‑101 (MQ=255)
tCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATcc > 2:3965788/1‑101 (MQ=255)
ccccAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCg > 1:1793067/1‑101 (MQ=255)
ccccAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCg > 2:2609951/1‑101 (MQ=255)
cccAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCgg > 2:1210193/1‑101 (MQ=255)
catgttacgggggggGGG..GG.GGCCAGGGCCCCC.C.CCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGtt < 1:955262/91‑1 (MQ=255)
aaaTATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTc > 2:4445064/1‑101 (MQ=255)
aaTATCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCa > 2:294703/1‑101 (MQ=255)
atatCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAg > 2:271252/1‑101 (MQ=255)
gggccGGGGGGGC..GGCGGGCCCCGCCCCCCCCCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCa < 2:3945667/98‑1 (MQ=255)
tCCCGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTc > 2:2186415/1‑101 (MQ=255)
ccGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGa > 2:2365489/1‑101 (MQ=255)
ccGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGa > 2:563544/1‑101 (MQ=255)
ccGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGa > 1:2683732/1‑101 (MQ=255)
ccGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGa > 1:3600483/1‑101 (MQ=255)
cGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaa > 2:5651407/1‑101 (MQ=255)
cGGGGGTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaa > 1:1388275/1‑101 (MQ=255)
gggggTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaaa > 1:4188697/1‑101 (MQ=255)
ggTGC..GG.GGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATcc > 1:4699208/1‑101 (MQ=255)
|
CGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC.GGGGATATTTGGGGCAAGATAAAGGGGCTTTGC.TTTTATCTT.TCCCCAAATATCCCGGGGGTGC..GG.GGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCC > NC_014034/3439729‑3439929
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|