| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 460,808 | T→C | 2.2% | intergenic (‑238/+158) | creA ← / ← mdtB | creatinase/multidrug resistance protein MdtB |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 460,808 | 0 | T→C | 2.2% | 2.1 ‑1.2 ‑1.3 | 179 | intergenic (‑238/+158) | creA/mdtB | creatinase/multidrug resistance protein MdtB |
| Reads supporting (aligned to +/- strand): new base (4/0): ref base (111/64): total (115/64) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.98e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.02e-02 | ||||||||||
Only 100 of 230 total aligned reads displayed.
CCGCTGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGTTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCTTTGGGCCCCGGCGGGTCTTG > NC_014034/460709‑460908
|
ccGCTGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCTCGACCGTGTCCTc > 1:5508325/1‑101 (MQ=255)
ccGCTGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTc > 2:4712641/1‑101 (MQ=255)
cGCTGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCa < 2:4825867/101‑1 (MQ=255)
cGCTGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCa > 2:1789592/1‑101 (MQ=255)
cGCTGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCa < 1:1868758/101‑1 (MQ=255)
cGCTGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCa < 1:714072/101‑1 (MQ=255)
gCTGGCAAGGGGCGGCTATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGTCGCAACGGCTGTTCCGCGACCGTGTCCTCaa < 2:4219991/101‑1 (MQ=255)
gCTGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCaa < 1:3717732/101‑1 (MQ=255)
tGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGc < 1:1152571/101‑1 (MQ=255)
tGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGc < 1:5740928/101‑1 (MQ=255)
aGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGAc > 2:1108690/1‑101 (MQ=255)
ggggCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACa < 2:2887888/101‑1 (MQ=255)
ggggCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACa < 2:1209841/101‑1 (MQ=255)
ggcggcGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACaga < 1:3415830/101‑1 (MQ=255)
gcggcgATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACagag > 1:1045147/1‑101 (MQ=255)
ggcgATGTGCCGGGTGCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGc > 1:4882278/1‑101 (MQ=255)
gcgATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGcc < 2:4414451/101‑1 (MQ=255)
gcgATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAAAGGcc < 1:1566838/101‑1 (MQ=255)
cgATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCg < 1:4343931/101‑1 (MQ=255)
cgATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCg > 2:4870025/1‑101 (MQ=255)
atctgtgCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCg < 1:5011469/98‑1 (MQ=255)
gATGTGCCGGGTTGGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGcccg > 1:3850864/1‑99 (MQ=255)
tgtgCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGgcg < 1:4231636/101‑1 (MQ=255)
tgtgCCGGGTTCGGGCAGATCAGGAAAAGCCCCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGgcg < 2:2775140/101‑1 (MQ=255)
gtgCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCTTGACAGAGGCCGgcgc > 1:1138107/1‑101 (MQ=255)
tgCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCgcc < 2:3120715/101‑1 (MQ=255)
gCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGGgccc > 2:5700444/1‑101 (MQ=255)
gCCGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCgccc < 2:3956665/101‑1 (MQ=255)
ccgatcttCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCgccc < 1:5697995/95‑1 (MQ=255)
ccGGGTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCgcccg < 2:5669971/101‑1 (MQ=255)
gggTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCgcccggc < 1:4500418/101‑1 (MQ=255)
gggTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCgcccggc > 2:511561/1‑101 (MQ=255)
gTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCTTGTCCTCAAGCGTGACAGAGGCCGGCgcccggtcc < 1:3304456/101‑1 (MQ=255)
gTTCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCgcccggccc < 1:4631117/101‑1 (MQ=255)
ttCGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCgcccggcccc > 1:4479477/1‑100 (MQ=255)
cGGGCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCccggcccggc > 1:122377/1‑101 (MQ=255)
gggCGGATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGGGCCCGGCCcggcg > 1:2307782/1‑101 (MQ=255)
gcgggATCAGGAAAAGCACCGCTTTTGCCCGCCCGTCGGCGCACCGGCTGTTCGGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCGGCCCcggcgg < 2:4802009/98‑1 (MQ=25)
ggATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCCGCCCggcgggcg > 1:5037958/1‑101 (MQ=255)
gATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGGGCCCGGCCCagcgggcgg > 2:3420269/1‑100 (MQ=255)
gATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCga < 2:698871/101‑1 (MQ=255)
gATCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGATGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCga < 1:4052397/101‑1 (MQ=255)
tCAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGGGCCCGGCCCCGCGGGCgaga > 2:388091/1‑101 (MQ=255)
cAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGaa < 2:35636/101‑1 (MQ=255)
cAGGAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCCGCCCGGCGGGCgagga > 1:3204373/1‑99 (MQ=255)
ggAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAgc < 2:1019216/101‑1 (MQ=255)
ggAAAAGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAgc < 2:407962/101‑1 (MQ=255)
gAAAAGCCCCGGTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAgcg < 2:429709/101‑1 (MQ=255)
aaaaGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCggcgggcggggagggc > 2:1880005/1‑93 (MQ=255)
aaaGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGGGCCCGCCCCGGCGGGCGAGAAAcgcc > 2:322296/1‑101 (MQ=25)
aaaGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGcgcc < 1:5080628/101‑1 (MQ=255)
aaGCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGcgccc < 2:5341858/101‑1 (MQ=255)
aGCCCCGCTTTTCCCCGCCGGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGcgcccg < 2:1346891/101‑1 (MQ=255)
gCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGGGCCCCGCCCGGCGGGCGGGAAGcgccccc > 1:3745002/1‑99 (MQ=37)
gCACCGCTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGGGAGAAGcgcccgc > 2:3317239/1‑101 (MQ=255)
cgcttttCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCCGCCCCGCGGGGGGGAAGcgcccggcccg > 1:1987000/4‑96 (MQ=25)
ctttcCCCCGCCCGTCGGCGAAACGGCTGTTCCGCGACCGTGTCCTCAAGCGGGACAGGGGCCGGCGCCGGGCCCGGCGGGCGAGAGGCGCCCGCCATggg < 2:1235879/100‑1 (MQ=25)
tttCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGACCCGCCCGGCGGGCGAAAAACGCCCGCCAAcggcg > 2:3615884/1‑101 (MQ=37)
tCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCCGCGGGCGGGAAGCGCCCCCCCCggggggg > 1:2078107/1‑101 (MQ=37)
tCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCCGCCCGGCGGGGGGGAAACCCCCCCCCAcggcggg > 1:2121187/1‑101 (MQ=37)
cccgcccgTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGCCGGGGGGAAAGCGCCCGCCACgggcggggg > 2:920494/1‑100 (MQ=37)
cccgcccgCGGGCGCAAGGGCTGTTCCGCGCCCGTGTCCTCAAGCGTGACAGGGGCCGGCGCCCGGCCGGGGGGGCGAGAAGCGCCCGCCATgggcggggc < 1:1735484/101‑1 (MQ=21)
cccccccgGGGGCGAAACGGCTGTTCCGCGACCGTGTCCTCAGGCGTGACAGAGGCCGGCGCCCGGCCGGGCGGGCGAGAAGCGCCCGCCATgggcggggc < 1:282867/101‑1 (MQ=18)
ccgccggCCGGCGCACCGGCTGTTCCGCGCCCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCGGGCGGGCGAGAAGCGCCCGCCATgggcggggcg < 2:3843313/101‑1 (MQ=21)
gcccgTCGGCGCAACGGCTGTTCCGCGCCCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCGGGCGGGGGAGAAGCGCCCGCCATGGgcggggcggg < 2:2928565/101‑1 (MQ=255)
gcccgTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGGGAAGCGCCCGCCCCGGgcgggggggg > 1:2747459/1‑101 (MQ=25)
cccgGCGGCGCAAGGGCTGTCCCGCGCCCGTGCCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGgggcgggc < 1:1592706/101‑1 (MQ=18)
gTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGGGAAACGCCCGCCATGGGCGGGGCGGgcg.cg > 2:4477927/1‑100 (MQ=255)
gTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCCGGCCGGGGGGCGAGAAGCCCCCGCCAGCGGCGGGGGGGGCG.Ct > 1:4303982/1‑101 (MQ=25)
tagtaccAACGGCTGCTCCGCCTCCGTGTCGTTAAGGTTGAAAAAGGCGGTCCCCCGGCCCGGCGGGCAAGGCTCTCCCGCCATGGGCGGGGCGGGCG.CTg < 1:61489/95‑1 (MQ=9)
ggCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCCTGGGCGGGGCGGGCG.CGGGc > 2:5460484/1‑101 (MQ=255)
gcaccgtgtGTTCCGCGCCCGTGTCCTCAAGGGGGACAGAGGCCGGCGCCCGCCCCGGGGGGGGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.gg < 1:1317827/93‑1 (MQ=17)
caccGGCTTTTCCGCGACCGTGTCCCCAAGCGGGACAGAGGCCGGCCCCCGGCCGGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.ggg < 1:5321825/98‑1 (MQ=17)
acgggCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.gggg < 1:5468200/98‑1 (MQ=255)
aaCGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCCCCATGGGCGGGGGGGGGG.CTGGCC.cggg > 2:1885854/1‑101 (MQ=21)
aCGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGGGAAGGGCCCGCCATGGGCGGGGGGGGGG.GCGGCC.ggggg > 1:2921982/1‑101 (MQ=21)
ggCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCCTGGGCGGGGCGGGCG.CTGGCC.GGGGGcc > 1:4785026/1‑101 (MQ=255)
ggCTGTCCCGCGACCGTCCCCTCAAGCGTGACAGGGGCCGGCCCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGcc < 2:1718412/101‑1 (MQ=18)
cggttcaccGCGACCGTTTCCCCAAGTGCAACAGAGGCCAGCGCCCGACCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGGGCCGGGCC.gggggt > 1:3986579/8‑100 (MQ=17)
gCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGGG.CTGGCC.GGGGGccc > 1:3059650/1‑100 (MQ=255)
gCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCCCCCTCGGCGGGGAGGGGG.CGGGCC.CGGGGGCt > 2:822185/1‑101 (MQ=18)
gCTGTTCCGCCCCCGTGTCCTCAAGGGGGACAGGGGCCGGCCCCCGGCCCGGGGGGCGAGAAGCCCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCt < 1:5379021/101‑1 (MQ=17)
ccgTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCCTGGGCGGGGCGGGCG.CCGGCC.ggggggcct > 1:451444/3‑97 (MQ=18)
cTGTTCCGCGACGGTGCCCTAAGGCGTGACGGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCtt < 2:1499846/101‑1 (MQ=17)
tttcccGCGCCGGTGCCCTCAAGGGTGACGGGGCCGGGCCCCCGGCCGGGGGGGCGAAAGCCCCCCGCCATGGGCGGGTCGGGCG.CTGGCC.GGGGGCCttt < 2:5318813/97‑1 (MQ=12)
tGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGGGCAGGGCCCGCCAGGGGCGGGGCGGGGG.CTCGCC.CGGGGCCtct > 1:4386811/1‑99 (MQ=18)
gtcccGCGCCCGTGCCCTCAAGCGTGACAGGGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCTTTg < 2:3478437/98‑1 (MQ=17)
gTTCCGCGCCCGTGCCCTCAGGCGGGACAGGGGCCGGCGCCCGGCCGGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCTTTg < 2:2906626/101‑1 (MQ=17)
gTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CCGGGC.GGGGGGCCTTg > 2:2164378/1‑101 (MQ=18)
gTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCCGCCCGGCGGGCGAGAAGCGCCCCCCCCGGGGGGGGCGGGGG.GGGGGC.GGGGGGCCTTg > 1:24668/1‑101 (MQ=18)
cccGCGGCCGTGCCCCCAAGCGTGACAGAGGCCGGCCCCCGGCCGGGCGGGGGAGAAGCCCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCTTTggg < 1:4850569/100‑1 (MQ=14)
ccGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCCTGGGGGGGGGGGGCG.CGCGCC.CGGGGCCCTTgggg > 2:38095/1‑100 (MQ=17)
gACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGGGGGCG.CCGGCC.GGGGGCCTTTTGGCGCcg > 2:3336579/1‑101 (MQ=17)
gACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCAAGGGCGGGGCGGGCG.CCGGGC.GGGGGCCCTTTGGCCCcg > 2:513611/1‑101 (MQ=17)
ccgatcttCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCTTTGGGCCCcg < 2:2550721/94‑1 (MQ=255)
cggtgtCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCTTTGGGCCCcggc < 2:4612151/99‑1 (MQ=255)
ccGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CCGGCCGGGGGGCCTTGGGGCCCcgc > 2:505878/1‑100 (MQ=17)
ggtCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCTTTGGGCCCCGGCggg < 2:1662092/100‑1 (MQ=255)
cTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCCTTGGGCCCCGGCGGGGCtt > 2:5410086/1‑101 (MQ=255)
tCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CCGGCC.CGGGGCCTTTGGGCCCCCGCcgggcctg > 2:5500155/1‑96 (MQ=14)
|
CCGCTGGCAAGGGGCGGCGATGTGCCGGGTTCGGGCGGATCAGGAAAAGCACCGTTTTTCCCCGCCCGTCGGCGCAACGGCTGTTCCGCGACCGTGTCCTCAAGCGTGACAGAGGCCGGCGCCCGGCCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCG.CTGGCC.GGGGGCCTTTGGGCCCCGGCGGGTCTTG > NC_014034/460709‑460908
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|