| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,212,553 | +C | 2.2% | intergenic (+17/‑396) | gltX1 → / → gcvT1 | glutamyl‑tRNA synthetase/glycine cleavage T protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,212,553 | 1 | .→C | 2.2% | 2.1 ‑3.5 0.0 | 139 | intergenic (+17/‑396) | gltX1/gcvT1 | glutamyl‑tRNA synthetase/glycine cleavage T protein |
| Reads supporting (aligned to +/- strand): new base (3/0): ref base (41/95): total (44/95) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.02e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 183 total aligned reads displayed.
CGCAAGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGTCCGGGTCCGAAGGTGTCGGT > NC_014034/1212453‑1212653
|
cgcAAGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAgg < 1:163829/101‑1 (MQ=255)
gcAAGGCGCTGCCGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAGggg > 2:3726651/1‑100 (MQ=255)
gcAAGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.c < 2:3408113/101‑1 (MQ=255)
cAAGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAggtc > 1:213317/1‑99 (MQ=255)
cAAGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAgggc > 1:1084122/1‑99 (MQ=255)
cAAGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAgggc > 1:1613304/1‑99 (MQ=255)
cAAGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.Ct < 1:682170/101‑1 (MQ=255)
aaGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTg < 1:1413297/101‑1 (MQ=255)
aaGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTg > 2:3836662/1‑101 (MQ=255)
aGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGCAGGGGCGCGTCAAGGCGCGACGGCTGGAGGGTGAAGG.CTgg > 1:2844795/1‑101 (MQ=255)
aGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTgg < 2:13462/101‑1 (MQ=255)
ggCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTggg < 1:604784/101‑1 (MQ=255)
gcTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGgc < 2:1086488/101‑1 (MQ=255)
tGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.GCgggggggg > 1:257798/1‑98 (MQ=255)
tGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGgggc > 2:331512/1‑101 (MQ=255)
gACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTggggggggt > 2:2037267/1‑97 (MQ=255)
gACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.t < 2:4171908/101‑1 (MQ=255)
gACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CGcgggggggg > 2:81195/1‑97 (MQ=255)
cAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCa < 1:452063/101‑1 (MQ=255)
cAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCa < 2:964497/101‑1 (MQ=255)
cAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.GG.CCCCCa > 2:678114/1‑101 (MQ=255)
aGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGGGC.GG.ccccccc > 1:2375516/1‑99 (MQ=255)
aGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAg < 1:3392930/101‑1 (MQ=255)
aGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAg > 2:2694441/1‑101 (MQ=255)
ggCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGa < 1:1665664/101‑1 (MQ=255)
ggCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGa < 1:1973141/101‑1 (MQ=255)
cATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.GGCGGGGTCC.TC.GCCCCACA.cccc > 2:2659881/1‑101 (MQ=255)
aTGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGGCCGGGGGGGGG.GG.CCCCCAGC.cccc > 1:3203709/1‑101 (MQ=255)
tGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCCC.GG.GCCCCCGA.CCCCCg > 2:3104790/1‑101 (MQ=255)
ggCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCggg < 1:2536868/101‑1 (MQ=255)
ggCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCggg < 1:3433235/101‑1 (MQ=255)
gCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGa < 1:3740360/101‑1 (MQ=255)
cccGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGat < 2:2389761/101‑1 (MQ=255)
cccGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGat < 2:1340846/101‑1 (MQ=255)
cccGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CCGGGGGGGG.CC.CACCCCGA.CCCCCcggca > 2:1157881/1‑99 (MQ=255)
cGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGGCCGGGGGGGGG.GG.CCCCCCAA.CCCCCggggat > 1:1602551/1‑98 (MQ=255)
gagaTGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATAtt < 2:3055524/101‑1 (MQ=255)
agaTGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGACGG.CTCGGGGCGCGTC.CCCCCAGC.ccccccgaggact > 2:4234498/1‑93 (MQ=255)
agaTGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATAttt < 1:2470627/101‑1 (MQ=255)
gCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGc < 1:1478971/101‑1 (MQ=255)
gcGATCTGATGCCGGTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCa < 2:2793394/100‑1 (MQ=255)
gATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CCGGGGGGGG.GG.CCCCCCCA.CCCCCCGGGGAGTTGTTGCAAg > 2:1653976/1‑101 (MQ=255)
gATCTGATGCCGCCGATGCAGAAGGTGCGCGCCTAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAg < 1:3639281/101‑1 (MQ=255)
tCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAt < 1:3104893/101‑1 (MQ=255)
cTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.g < 2:1495709/101‑1 (MQ=255)
cTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.g < 2:4056386/101‑1 (MQ=255)
gATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.aa < 1:1892292/101‑1 (MQ=255)
gATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.aa < 1:233369/101‑1 (MQ=255)
gATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.aa < 1:1223767/101‑1 (MQ=255)
aTGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.aaa < 2:3144419/101‑1 (MQ=255)
ccGCTGATGCAGAAGGTGCGCGCCGAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAggg < 1:3061172/101‑1 (MQ=255)
ccGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAggg < 2:1643056/101‑1 (MQ=255)
cGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.GCCCCAGG.CCCCCGGGACATTTTTGGCAAGAT.G.CAAGGGc > 2:2850911/1‑101 (MQ=37)
cGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCCGGGTATTTGTGGCAAGAT.G.AAAAGGc > 2:2496798/1‑101 (MQ=255)
cTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.cg < 1:637029/101‑1 (MQ=255)
tGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGC.CCCCCGGGATATTTGTGGCAAGATGG.AAAGGGcgc > 2:1942384/1‑99 (MQ=255)
gATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.cgc.g < 1:4234760/101‑1 (MQ=255)
aTGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.gg < 2:2375340/101‑1 (MQ=255)
tGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCCGA.CCCCCGGGGTATTTGTGGGAAGAT.G.AAAAGGC.CCC.ggg > 2:2696748/1‑101 (MQ=37)
gCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGt < 2:1684942/101‑1 (MQ=255)
gCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CCGGGGGGGC.CG.CCCCCCGA.ACCCCCGGGGATTTGTGGCAAGAT.G.AAAAGGG.CGG.gggg > 1:2623888/1‑100 (MQ=255)
cAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGtt < 2:779783/101‑1 (MQ=255)
aGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGttt < 2:2360886/101‑1 (MQ=255)
aGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGttt < 2:1613195/101‑1 (MQ=255)
gAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGtttt < 2:494728/101‑1 (MQ=255)
gAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGtttt < 1:2694647/101‑1 (MQ=255)
aaGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTc < 1:1368559/101‑1 (MQ=255)
aGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTcc < 1:3089867/101‑1 (MQ=255)
aGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTcc < 1:3785907/101‑1 (MQ=255)
aGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTcc < 1:2806374/101‑1 (MQ=255)
aGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTcc < 2:3203470/101‑1 (MQ=255)
ggTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCg < 2:2974617/101‑1 (MQ=255)
gTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCgg < 1:2250329/101‑1 (MQ=255)
tGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGc < 2:1511697/101‑1 (MQ=255)
tGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGc < 2:3771617/101‑1 (MQ=255)
cgcgcCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCCGGGTATTTTTGGCAAAAT.G.AAAAGGC.CGC.GGGGTTTCCGGccc > 2:3960035/1‑101 (MQ=37)
cgcCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCtt < 1:1645568/101‑1 (MQ=255)
cAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCttttt < 1:2736239/101‑1 (MQ=255)
cAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCttttt < 1:331563/101‑1 (MQ=255)
cAAGGCGTGACGGCTGGGGGCTGAAGG.CCTGGGGCGC.GC.CCCCCCCA.TACCCCGGGCATTTTTGGAAAGGG.A.AAAGGGCGCCC.GGGTTTTCCGGcttcttt > 2:1881574/1‑95 (MQ=255)
cAAGGCGTGACAGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCttttt < 2:2275903/101‑1 (MQ=255)
aaGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGGGC.GG.CCCCCCGA.CCCCCGGGGTATTTGTGGGAAGAT.G.AAAAGGC.CGC.GGGGTTTCCGGCCCtttttt > 1:1129641/1‑101 (MQ=255)
aaGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCtttttt < 1:4004692/101‑1 (MQ=255)
aaGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCtttttt < 1:2313557/101‑1 (MQ=255)
aaGGCGTGACGGCTGGGGGCTGAAGG.CCGGGGGGGG.GGCCCCCCCGC.CCCCCGGGGCATTT.TGGCGAGGG.GAAAAGGGC.GGC.GGCTTTTTCGGCACttttt > 2:4076437/1‑101 (MQ=255)
aaGGCGTGACGGCTGGGGGCTGAAGG.CCGGGGGGGG.GG.CCCCCCGA.CCCCCCGGGGATTTTTGGGCAGAA.G.AAAAGGG.CGC.GGGGTTTTTGGGCCtttttt > 1:1068194/1‑101 (MQ=255)
aGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGGGG.CG.CCCCCCCACCCCCCGGGGGTTTTTTGGC.AGAT.G.AAAAGGG.CGCGGGGGTTTCCGCCCCtttttt > 2:2955085/1‑101 (MQ=255)
aGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGGGC.TG.GCCCCCGA.CCCCCCGGGGATTTGTGGGAAGAT.G.AAAAGGC.CGC.GGGGTTTTCGGCCCctttttt > 2:3469407/1‑100 (MQ=255)
gTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGt < 2:2746301/101‑1 (MQ=255)
gACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGTcc < 2:3936783/101‑1 (MQ=255)
cGGCTGGGGGCTGAAGG.CTGGGGGCGG.TG.GCCCCCGA.ACCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGCTTTCCGGGCCTTTTTTTATGTCCgg > 2:3977011/1‑101 (MQ=37)
cGGCTGAGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGTCCgg < 1:678191/101‑1 (MQ=255)
ggCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGGTATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGTCCggg > 2:2622065/1‑101 (MQ=255)
cTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGTCCGGGTc < 2:213279/101‑1 (MQ=255)
gggggCTGAAGG.CCGGGGGGGC.TG.CCCCCCCA.CCCCCCGGGTATTTTTGGCAAGAT.G.AAAGGGG.CGC.GGGGTTTCCCCCCCCTTTTTCCTTTCCCGGGCCg > 2:1807495/1‑101 (MQ=12)
ggggCGAAAGG.CCGGCGGCGC.TG.CCCCCAGA.CGCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGG.GGGTTTTCCGGCCCTTTTTTCATGTCCGGGTCCGa < 2:3534978/101‑1 (MQ=37)
cTGAAGG.CTGGGGTCTC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGTCCGGGTCCGAAGgt < 2:1414631/101‑1 (MQ=255)
tGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGTCCGGGGCCGAAgggg > 2:2041941/1‑99 (MQ=255)
aaGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGTCCGGGTCCGAAGGTGTc < 2:257753/101‑1 (MQ=255)
gg.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGTCCGGGTCCGAAGGTGTCgg < 1:1473620/101‑1 (MQ=255)
|
CGCAAGGCGCTGACGGGGCAGGCGCATGGGCCCGAGATGGCCGATCTGATGCCGCTGATGCAGAAGGTGCGCGCCAAGGCGTGACGGCTGGGGGCTGAAGG.CTGGGGGCGC.TG.CCCCCAGA.CCCCCGGGATATTTGTGGCAAGAT.G.AAAGGGC.CGC.GGGTTTTCCGGCCCTTTTTTCATGTCCGGGTCCGAAGGTGTCGGT > NC_014034/1212453‑1212653
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|