Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,396,028 +G 17.7% intergenic (+840/‑91) RCAP_rcc01306 → / → RCAP_rcc01307 Cas2 family CRISPR‑associated protein/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,396,0281.→G17.7% 137.9 ‑0.7 ‑0.0232intergenic (+840/‑91)RCAP_rcc01306/RCAP_rcc01307Cas2 family CRISPR‑associated protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (18/23):  ref base (96/95):  total (114/118)
Fisher's exact test strand distribution p-value = 4.95e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.71e-01

Only 100 of 255 total aligned reads displayed.

AACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCG  >  NC_014034/1395928‑1396126
                                                                                                     |                                                                                                     
aaCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGc                                                                                                        >  1:3849187/1‑101 (MQ=255)
 aCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGc.c                                                                                                      <  2:3353327/101‑1 (MQ=255)
   gATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.cgc                                                                                                    <  2:928101/101‑1 (MQ=255)
         ttCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCt                                                                                           >  1:1893527/1‑101 (MQ=255)
           cATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTcc                                                                                         >  2:193331/1‑101 (MQ=255)
           cATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTcc                                                                                         >  2:381471/1‑101 (MQ=255)
            aTGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTccc                                                                                        >  1:1948476/1‑101 (MQ=255)
              ggCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTccccc                                                                                      >  2:2889676/1‑101 (MQ=255)
                ccTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCcg                                                                                    >  2:1699789/1‑101 (MQ=255)
                ccTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATAGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCcg                                                                                    >  2:3662796/1‑101 (MQ=255)
                  tACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCcgcg                                                                                  >  2:755818/1‑101 (MQ=255)
                  tACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCcgcg                                                                                  >  2:3922200/1‑101 (MQ=255)
                   aCGGCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCgg                                                                                 <  1:1141378/101‑1 (MQ=255)
                     gTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCgggg                                                                               <  2:2390722/101‑1 (MQ=255)
                     gTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCgggg                                                                               <  2:2811970/101‑1 (MQ=255)
                     gTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCCAAACTCGCCCTCGATCCGCGCTGGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCgggg                                                                               >  1:3617631/1‑101 (MQ=255)
                       cGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGc                                                                             <  1:3592476/101‑1 (MQ=255)
                         ggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCgg                                                                           >  1:1708604/1‑100 (MQ=255)
                          gCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTg                                                                          <  1:1799531/101‑1 (MQ=255)
                           cAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..T.TCGCTCCCCCCGCGGGGGCGTgg                                                                         <  2:453388/101‑1 (MQ=255)
                             tctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGa                                                                        >  1:3156936/8‑101 (MQ=2)
                             tctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGa                                                                        <  2:3214898/94‑1 (MQ=2)
                             gTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGAt                                                                       <  1:2858544/101‑1 (MQ=255)
                             gTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGAt                                                                       <  2:2334680/101‑1 (MQ=255)
                              tGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATc                                                                      >  2:2109517/1‑101 (MQ=255)
                              tGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATc                                                                      <  1:927312/101‑1 (MQ=255)
                              tGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGAGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATc                                                                      <  1:207848/101‑1 (MQ=255)
                              ctgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGAt                                                                       <  1:4208619/95‑1 (MQ=9)
                                tcccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCg                                                                     <  2:2712976/97‑1 (MQ=2)
                                  cTGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                  <  1:2367227/101‑1 (MQ=255)
                                   tGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                 >  2:1846827/1‑101 (MQ=255)
                                    ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCTCGGGGGCCTGGATCGaaag                                                                 >  1:396753/1‑100 (MQ=2)
                                    ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                 >  1:3052589/1‑101 (MQ=2)
                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                                                <  1:505987/101‑2 (MQ=2)
                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAg                                                               >  1:2912480/1‑101 (MQ=255)
                                      tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgg                                                              >  2:467978/1‑101 (MQ=255)
                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAActtg                                                              <  2:587475/101‑4 (MQ=2)
                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAActtg                                                              <  1:3509242/101‑4 (MQ=2)
                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc                                                             >  2:1711441/1‑101 (MQ=255)
                                       cGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc                                                             <  1:3322865/101‑1 (MQ=255)
                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAActtga                                                             <  2:4027893/101‑5 (MQ=2)
                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAActtga                                                             >  1:2999454/1‑97 (MQ=2)
                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcg                                                            >  1:1928650/1‑101 (MQ=255)
                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcg                                                            >  2:283282/1‑101 (MQ=255)
                                         ccccccccGCGGGTGCGTGGATCGAAACCCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcgc                                                           <  2:2513377/99‑1 (MQ=255)
                                         cTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATACGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcgc                                                           <  1:2835540/101‑1 (MQ=255)
                                          tCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTGAGCCTC.GTATTGCGCGCT.GATCCCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg                                                           >  1:3615793/1‑95 (MQ=2)
                                          tCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg                                                           >  2:2942013/1‑95 (MQ=2)
                                          tCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg                                                           >  1:2561823/1‑95 (MQ=2)
                                           ccccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatga                                                          <  1:3038428/101‑8 (MQ=2)
                                           ccccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatga                                                          >  2:4179936/1‑94 (MQ=2)
                                           ccccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatga                                                          >  2:1368217/1‑94 (MQ=2)
                                           ccccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCCTC.GTATTGCGCGCTGG.TCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatga                                                          >  2:2148767/1‑94 (MQ=2)
                                            cccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATc                                                        <  2:3112689/101‑1 (MQ=255)
                                             ccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCt                                                       <  1:1354204/101‑1 (MQ=255)
                                                 gcgGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATg                                                   <  1:2267001/101‑1 (MQ=255)
                                                 gcgGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATg                                                   >  2:1268820/1‑101 (MQ=255)
                                                 gcgGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATg                                                   >  1:3759044/1‑101 (MQ=255)
                                                  cgGGTGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGt                                                  <  1:669620/101‑1 (MQ=255)
                                                  cgGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGt                                                  >  1:2788540/1‑101 (MQ=255)
                                                   gggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGta                                                 <  1:1671709/101‑1 (MQ=255)
                                                   gggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGta                                                 >  1:1541943/1‑101 (MQ=255)
                                                   gggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGta                                                 >  1:408324/1‑101 (MQ=255)
                                                    ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat                                                <  2:2730765/101‑1 (MQ=255)
                                                     gggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata                                               <  1:1718765/101‑1 (MQ=255)
                                                     gggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata                                               >  1:1300356/1‑101 (MQ=255)
                                                       gCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg                                             <  2:3526643/101‑1 (MQ=255)
                                                       gCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg                                             >  2:390086/1‑101 (MQ=255)
                                                          atcttCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGccc                                          <  2:2258235/97‑1 (MQ=255)
                                                             aTCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGt                                       >  1:1472090/1‑101 (MQ=255)
                                                              tCGAACCTCGCCCTCGATCCGCGCTTGCCTCACCCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTg                                      <  2:1031530/101‑1 (MQ=255)
                                                               cGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTga                                     >  1:1011463/1‑101 (MQ=255)
                                                                gAAGCTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag                                    <  2:2542354/101‑1 (MQ=255)
                                                                gAAGCTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag                                    <  2:205944/101‑1 (MQ=255)
                                                                gAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag                                    >  1:2099819/1‑101 (MQ=255)
                                                                    cTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACgg                                <  2:356649/101‑1 (MQ=255)
                                                                      cGCCCTCGATCGGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt                              <  2:2027570/101‑1 (MQ=255)
                                                                      cGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt                              <  2:2119572/101‑1 (MQ=255)
                                                                      cGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt                              <  2:3631529/101‑1 (MQ=255)
                                                                       gCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTg                             >  2:3201504/1‑101 (MQ=255)
                                                                        cccTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGt                            <  2:2980443/101‑1 (MQ=255)
                                                                           tCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGc                         <  2:648351/101‑1 (MQ=255)
                                                                            cGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCt                        >  1:380000/1‑101 (MQ=255)
                                                                            cGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCt                        <  2:1244082/101‑1 (MQ=255)
                                                                            cGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCt                        <  1:468035/101‑1 (MQ=255)
                                                                             gATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTc                       >  2:2130608/1‑101 (MQ=255)
                                                                               tCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTccc                     <  1:867209/101‑1 (MQ=255)
                                                                                    gcTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCcgc                >  2:1630614/1‑101 (MQ=255)
                                                                                     cTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCcgcg               >  2:815872/1‑101 (MQ=255)
                                                                                       tGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCggg             >  1:448454/1‑101 (MQ=255)
                                                                                         ccTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCggggg           <  1:3672249/101‑1 (MQ=255)
                                                                                          cTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc          >  2:1018930/1‑101 (MQ=255)
                                                                                          cTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc          <  1:2241768/101‑1 (MQ=255)
                                                                                          cTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc          <  2:1893407/101‑1 (MQ=255)
                                                                                           tCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCg         <  2:1394324/101‑1 (MQ=255)
                                                                                           tCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCg         <  2:1561111/101‑1 (MQ=255)
                                                                                            cACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGt        >  2:115725/1‑101 (MQ=255)
                                                                                            cACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGt        <  1:2952314/101‑1 (MQ=255)
                                                                                                 cTGC.GGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATc   <  1:3092648/101‑1 (MQ=255)
                                                                                                  tGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCg  >  1:1632037/1‑101 (MQ=255)
                                                                                                     |                                                                                                     
AACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGC.CGC..G.TCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCG  >  NC_014034/1395928‑1396126

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG