Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,057,833 | +A | 78.7% | intergenic (‑599/‑303) | RCAP_rcc01900 ← / → RCAP_rcc01901 | hemolysin‑type calcium‑binding repeat family protein/polyphosphate kinase 2 domain‑containing protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,057,833 | 1 | .→A | 78.7% | 106.0 ‑0.6 ‑0.3 | 150 | intergenic (‑599/‑303) | RCAP_rcc01900/RCAP_rcc01901 | hemolysin‑type calcium‑binding repeat family protein/polyphosphate kinase 2 domain‑containing protein |
Reads supporting (aligned to +/- strand): new base (54/64): ref base (17/15): total (71/79) | ||||||||||
Fisher's exact test strand distribution p-value = 5.50e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.77e-01 |
Only 100 of 167 total aligned reads displayed.
GTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.CGCG.CGC.A.GC.G.TT.CCGAACCGGCATCAATCTTGG.CCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCAAAGC > NC_014034/2057732‑2057913
|
gTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.c.cg.cgc > 1:4079464/1‑101 (MQ=255)
tCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.c.cg.cgcc < 1:332218/101‑2 (MQ=255)
tCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.c.cg.cgcc < 2:1895202/101‑2 (MQ=255)
tCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.c.cg.cgcc > 2:3515159/1‑100 (MQ=255)
ccTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.c.cg.cgccg > 1:1166207/1‑99 (MQ=255)
ccTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.c.cg.cgccg < 2:3822589/101‑3 (MQ=255)
cTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gc > 1:3507570/1‑101 (MQ=255)
cTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gc > 2:3444635/1‑101 (MQ=255)
tGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gca > 2:530425/1‑100 (MQ=255)
tGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gca < 1:610276/101‑2 (MQ=255)
tGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gca < 1:2563092/101‑2 (MQ=255)
gTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaa > 2:2581873/1‑99 (MQ=255)
gTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaa > 2:2633318/1‑99 (MQ=255)
gTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaa > 1:2372506/1‑99 (MQ=255)
tttACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaag < 1:267659/101‑4 (MQ=255)
tttACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaag > 1:2073121/1‑98 (MQ=255)
ttACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagc > 1:2599195/1‑97 (MQ=255)
ttACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagc > 1:2668288/1‑97 (MQ=255)
tACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagcg > 1:4138538/1‑96 (MQ=255)
aCCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagcgt < 2:217910/101‑7 (MQ=255)
aCCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagcgt > 1:2021460/1‑95 (MQ=255)
ccGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagcgtt < 1:143419/101‑8 (MQ=255)
ccGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagcgtt < 2:366527/101‑8 (MQ=255)
ccGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagcgtt < 1:298756/101‑8 (MQ=255)
ccGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagcgtt < 2:3021485/101‑8 (MQ=255)
ccGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagcgtt > 1:505695/1‑94 (MQ=255)
cGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.C.CG.CGC.C.Gcaagcgttt > 1:930712/1‑93 (MQ=255)
aaCCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCg > 2:737565/1‑101 (MQ=255)
aaCCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCg > 2:289009/1‑101 (MQ=255)
cccTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGc < 1:65878/101‑1 (MQ=255)
ccTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCa < 2:3323212/101‑1 (MQ=255)
cTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCAt > 1:3987653/1‑101 (MQ=255)
cTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCAt > 1:336033/1‑101 (MQ=255)
tGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAC.TAC.CCCGCCGCAA.GCGG.TT.CCGAACCGGCATc > 2:1560836/1‑101 (MQ=255)
tGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATc > 2:2125239/1‑101 (MQ=255)
tGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATc > 2:366991/1‑101 (MQ=255)
gCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCa > 2:1679883/1‑101 (MQ=255)
ttCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCatt < 2:3502260/101‑3 (MQ=255)
ttCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCatt > 2:2765985/1‑99 (MQ=255)
ttCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CGCGCGCCGCAA.GC.GTTT.CCGTACCGGCATCatt > 2:380146/1‑99 (MQ=255)
tCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTc > 2:3251354/1‑101 (MQ=255)
cGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCt > 1:893358/1‑101 (MQ=255)
cGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCt > 1:941540/1‑101 (MQ=255)
cGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCt < 1:2842665/101‑1 (MQ=255)
ggCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCtt < 1:354524/101‑1 (MQ=255)
cgGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGG.cccc > 2:3867871/1‑101 (MQ=255)
gACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGG.cccccc < 1:145878/101‑2 (MQ=255)
gACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGG.cccccc < 1:328166/101‑2 (MQ=255)
aCTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGG.ccccccg < 2:2372330/101‑3 (MQ=255)
tCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGG.ccccccgccg < 1:3091032/101‑6 (MQ=255)
gggCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGa > 2:2925284/1‑101 (MQ=255)
ggcggcggcGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGAc > 2:3995263/1‑101 (MQ=255)
ggcggcggcGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGAc < 1:1876978/101‑1 (MQ=255)
cggcggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACaa < 1:1743740/101‑1 (MQ=255)
gggggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAAt < 1:1679998/98‑1 (MQ=255)
gcggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATc < 1:2515319/101‑1 (MQ=255)
ggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCAc < 2:505638/101‑1 (MQ=255)
gcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACg > 2:2692038/1‑101 (MQ=255)
gcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACg < 2:3098337/101‑1 (MQ=255)
cttccgatctTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACg < 2:827031/94‑1 (MQ=255)
cggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACgg > 2:2417597/1‑101 (MQ=255)
ggggCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGgc > 1:1319674/1‑101 (MQ=255)
ggggCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGgc < 1:3787734/101‑1 (MQ=255)
ggggCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGgc > 1:50404/1‑101 (MQ=255)
ggCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGgccg < 2:930627/101‑1 (MQ=255)
ggCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGgccg < 2:1515937/101‑1 (MQ=255)
tctTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCt < 1:3034698/101‑1 (MQ=255)
ctTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTc > 1:67894/1‑101 (MQ=255)
ttGCGATCCTGCGTTTCCGGATTGGCGACAT.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCa < 1:3843217/101‑1 (MQ=255)
ttGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTcc > 1:822757/1‑100 (MQ=255)
ttGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCa > 1:1175039/1‑101 (MQ=255)
tGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCAt > 2:81802/1‑101 (MQ=255)
tGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCAt > 2:975240/1‑101 (MQ=255)
tGCGATCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCAAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCAt < 2:258077/101‑1 (MQ=255)
gATCCTTCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GCTT.TT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGt < 2:2056094/101‑1 (MQ=255)
tCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTc > 2:3824556/1‑101 (MQ=255)
tCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTc > 1:3698311/1‑101 (MQ=255)
tCCTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGC.ACGC.GTTT.CCGAACCGGCATCGTTCTTGGCCCCCCGCCGGGTCAATCACGGCCGCCTCATTGTTc < 1:3617281/101‑1 (MQ=255)
cTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTccc > 2:3135731/1‑100 (MQ=255)
cTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCg > 1:2142521/1‑101 (MQ=255)
cTGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCg < 1:1592229/101‑1 (MQ=255)
tGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATTATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGc > 1:3958023/1‑101 (MQ=255)
tGCGTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGc < 1:2844047/101‑1 (MQ=255)
gTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCAt > 2:3313142/1‑101 (MQ=255)
gTTTCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCAt < 2:4138276/101‑1 (MQ=255)
gTTTCCGGAGTGGCGACAA.TCC.CGCGCCGCAA.AC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCCCGGCCGCCTCATTGTTCCGCCAt < 1:2035109/101‑1 (MQ=255)
tttCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCAtt < 2:3579780/101‑1 (MQ=255)
tttCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCAtt < 2:1253953/101‑1 (MQ=255)
ttCCGGATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTg < 1:27735/101‑1 (MQ=255)
ttCCGGAGTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCAGCCATTg < 1:1692159/101‑1 (MQ=255)
ggATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGAt > 2:1549081/1‑101 (MQ=255)
gATTGGCGACAACC.C.CGCGCCGCAA.GC.G.TTCCCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCAATTGCGATc < 2:399230/101‑1 (MQ=255)
gATTGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCCTTGTTCCGCCATTGCGATc > 1:2374404/1‑101 (MQ=255)
aTTGGCTACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCa < 2:1809245/101‑1 (MQ=255)
ttGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCaa > 2:12378/1‑101 (MQ=255)
ttGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCaa < 2:201029/101‑1 (MQ=255)
tGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCaaa < 1:2720854/101‑1 (MQ=255)
tGGCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCaaa < 2:2540734/101‑1 (MQ=255)
ggCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGAACCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCAAAg > 2:3204027/1‑101 (MQ=255)
gCGACAA.TCC.CGCGCCGCAA.GC.GTTT.CCGACCCGGCATCATTCTTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCAAAGc < 1:1867937/101‑1 (MQ=255)
|
GTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.C.CGCG.CGC.A.GC.G.TT.CCGAACCGGCATCAATCTTGG.CCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCAAAGC > NC_014034/2057732‑2057913
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|