Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,165,868 +C 100% intergenic (‑173/‑211) RCAP_rcc02007 ← / → tig phage integrase/trigger factor

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,165,8681.→C100.0% 644.5 168intergenic (‑173/‑211)RCAP_rcc02007/tigphage integrase/trigger factor
Reads supporting (aligned to +/- strand):  new base (88/80):  ref base (0/0):  total (88/80)

Only 100 of 183 total aligned reads displayed.

CTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTT.C.TCTG.CCTG.CCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGAAA  >  NC_014034/2165771‑2165954
                                                                                                    |                                                                                       
cTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTAGTGCATACTACCCGCACCATCTGACCTTTCC.Tctg.cc                                                                                       >  1:2945978/1‑101 (MQ=255)
 tttGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.Tctg.ccc                                                                                      >  1:2302054/1‑100 (MQ=255)
 tttGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.Tctg.ccc                                                                                      >  1:1802053/1‑100 (MQ=255)
  ttGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.Tctg.ccct                                                                                     <  1:2017/101‑3 (MQ=255)
   tGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.Tctg.ccctg                                                                                    <  2:3399422/101‑4 (MQ=255)
   tGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.Tctg.ccctg                                                                                    <  2:766889/101‑4 (MQ=255)
    gcggcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.Tctg.ccctgc                                                                                   >  1:1161306/1‑97 (MQ=255)
     cggcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.Tctg.ccctgcc                                                                                  <  1:1469313/101‑6 (MQ=255)
      ggcgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTG.ccc                                                                                 >  1:2492400/1‑101 (MQ=255)
        cgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTG.ccccg                                                                               <  1:987177/101‑3 (MQ=255)
        cgTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTG.ccccg                                                                               >  2:1677118/1‑99 (MQ=255)
         gTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTG.ccccgc                                                                              >  1:2061404/1‑98 (MQ=255)
            gagaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCt                                                                            <  1:1734148/101‑1 (MQ=255)
            gagaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCt                                                                            <  1:2671936/101‑1 (MQ=255)
            gagaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCt                                                                            >  1:1234038/1‑101 (MQ=255)
             agaTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTg                                                                           <  1:2743498/101‑1 (MQ=255)
               aTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGcc                                                                         >  1:4084956/1‑101 (MQ=255)
               aTTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGcc                                                                         >  2:4186512/1‑101 (MQ=255)
                  tCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGtc                                                                      >  1:1851922/1‑101 (MQ=255)
                   cccGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGtct                                                                     >  1:813972/1‑101 (MQ=255)
                   cccGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGtct                                                                     >  2:1653195/1‑101 (MQ=255)
                    ccGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGtctc                                                                    >  2:1866152/1‑101 (MQ=255)
                    ccGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGtctc                                                                    <  1:594274/101‑1 (MQ=255)
                     cGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCg                                                                   <  2:614740/101‑1 (MQ=255)
                      ggggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCgg                                                                  <  2:3624245/101‑1 (MQ=255)
                      ggggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCgg                                                                  >  1:86543/1‑101 (MQ=255)
                      ggggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCgg                                                                  <  2:2434219/101‑1 (MQ=255)
                       gggCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCggg                                                                 <  2:1957903/101‑1 (MQ=255)
                          cgcAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCg                                                              >  1:832424/1‑101 (MQ=255)
                           gcAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCgt                                                             >  1:290093/1‑101 (MQ=255)
                            cAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCgtc                                                            >  1:133987/1‑101 (MQ=255)
                            cAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCgtc                                                            >  2:206006/1‑101 (MQ=255)
                             agagTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCgtct                                                           >  2:2180153/1‑101 (MQ=255)
                             agagTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCgtct                                                           >  2:3847093/1‑101 (MQ=255)
                             agagTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCgtct                                                           >  1:4227566/1‑101 (MQ=255)
                              gagTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCgtctg                                                          <  2:2251250/101‑1 (MQ=255)
                               agTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCgtctgt                                                         >  2:3038902/1‑101 (MQ=255)
                                gTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCgtctgtc                                                        >  1:3926076/1‑101 (MQ=255)
                                 tCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCgtctgtct                                                       <  2:2488050/101‑1 (MQ=255)
                                  cAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGtctgtctg                                                      <  1:1653310/101‑1 (MQ=255)
                                    aCCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTggg                                                    >  2:3404254/1‑101 (MQ=255)
                                       tGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGa                                                 >  2:1423703/1‑101 (MQ=255)
                                       tGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGa                                                 >  2:3700033/1‑101 (MQ=255)
                                        gagaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGaa                                                <  2:2783386/101‑1 (MQ=255)
                                         agaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAAt                                               <  1:1573217/101‑1 (MQ=255)
                                          gaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATc                                              >  2:2769613/1‑101 (MQ=255)
                                          gaCGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATc                                              <  1:1952306/101‑1 (MQ=255)
                                           aCGGCATGCAACACGACACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCt                                             >  1:3021213/1‑101 (MQ=255)
                                            cGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCtt                                            >  1:557670/1‑101 (MQ=255)
                                              gCATGCAACACGGCACGGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCtttt                                          <  2:284491/101‑1 (MQ=255)
                                               cATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTc                                         >  1:3327662/1‑101 (MQ=255)
                                               cATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTc                                         >  1:3302329/1‑101 (MQ=255)
                                               cATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTc                                         <  1:1276654/101‑1 (MQ=255)
                                                ntGNNACACGGCACTGGTGCAGCCCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCg                                        <  1:3441568/100‑1 (MQ=255)
                                                   cAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATc                                     >  1:4196090/1‑101 (MQ=255)
                                                   cAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATc                                     >  1:3540843/1‑101 (MQ=255)
                                                     acacGGCACTGGTGCAGCCCACCCGCACCATCTGACCTTT.CGTCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCtt                                   <  1:2348350/101‑1 (MQ=255)
                                                      cacGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCttt                                  <  1:1954358/101‑1 (MQ=255)
                                                      cacGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCttt                                  <  2:1851802/101‑1 (MQ=255)
                                                       ccGGCACTGGTGCAGCCCACCCGCCCCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTc                                 <  1:672187/100‑1 (MQ=255)
                                                        cGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCt                                >  2:3234154/1‑101 (MQ=255)
                                                        cGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCt                                >  2:436172/1‑101 (MQ=255)
                                                        cGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCt                                >  1:2547656/1‑101 (MQ=255)
                                                        cGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCt                                >  2:2677685/1‑101 (MQ=255)
                                                        cGGCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGAGTCTGTCTGGGCGAATCTTTTCGATCTTTCt                                <  1:3909613/101‑1 (MQ=255)
                                                         ggCACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTg                               <  2:3877916/101‑1 (MQ=255)
                                                           cACTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTAGATCTTTCTGcc                             >  2:3561237/1‑101 (MQ=255)
                                                            aCTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCcg                            <  2:1159470/101‑1 (MQ=255)
                                                            aCTGGTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCcg                            <  1:3759277/101‑1 (MQ=255)
                                                             cTGGTGCAGACCACCCGCCCCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCcgc                           <  2:4107350/101‑1 (MQ=255)
                                                               ggTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCNGNNNGAATCTTTTCGATCTTTCTGCCgcgc                         >  1:2273401/1‑101 (MQ=255)
                                                                gTGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGcc                        >  2:915014/1‑101 (MQ=255)
                                                                 tGCAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCg                       >  2:426471/1‑101 (MQ=255)
                                                                   cAGACCACCCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCggg                     >  1:284655/1‑101 (MQ=255)
                                                                       ccaccCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCg                 <  2:3114749/101‑1 (MQ=255)
                                                                         ccccGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaa               <  2:2070272/100‑1 (MQ=255)
                                                                         accCGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaa               >  2:2039849/1‑101 (MQ=255)
                                                                          cccGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaa              >  2:2396973/1‑101 (MQ=255)
                                                                          cccGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaa              <  2:2547045/101‑1 (MQ=255)
                                                                           ccGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGaaaa             >  2:3864232/1‑101 (MQ=255)
                                                                            cGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAAc            <  1:2409850/101‑1 (MQ=255)
                                                                            cGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAAc            <  2:1185652/101‑1 (MQ=255)
                                                                            cGCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAAc            >  1:3979164/1‑101 (MQ=255)
                                                                             gccccATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACg           <  1:1677756/98‑1 (MQ=255)
                                                                             gCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACg           >  1:3822086/1‑101 (MQ=255)
                                                                             gCACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACg           >  1:3254971/1‑101 (MQ=255)
                                                                              cACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACgg          >  2:2310949/1‑101 (MQ=255)
                                                                              cACCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGCCTCGGGGCGTCTTTCTGGGCGTATCTTTTCGATCTTTCTGCCGCACCGGGACGGAAAACgc          >  1:3519861/1‑100 (MQ=255)
                                                                               aCCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGc         <  2:3954561/101‑1 (MQ=255)
                                                                               aCCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGc         >  2:296238/1‑101 (MQ=255)
                                                                               aCCATCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCCTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGc         <  1:3617254/101‑1 (MQ=255)
                                                                                  ctCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCg      <  2:832343/100‑1 (MQ=255)
                                                                                  aTCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCg      <  2:4153754/101‑1 (MQ=255)
                                                                                  aTCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCg      >  1:631962/1‑101 (MQ=255)
                                                                                  aTCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCg      <  1:2180298/101‑1 (MQ=255)
                                                                                   tCTGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCgg     <  1:296283/101‑1 (MQ=255)
                                                                                    cTGCCCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGa    <  1:3708341/101‑1 (MQ=255)
                                                                                     tGACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaa   >  2:2614534/1‑101 (MQ=255)
                                                                                      gACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGaaa  <  1:3314471/101‑1 (MQ=255)
                                                                                      gACCTTTCC.TCTGCCCTGCCCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCCGaaa  >  1:2468045/1‑101 (MQ=255)
                                                                                                    |                                                                                       
CTTTGCGGCGTTGAGATTTCCCGGGGCGCAGAGTCAACCTGAGACGGCATGCAACACGGCACTGGTGCAGACCACCCGCACCATCTGACCTTT.C.TCTG.CCTG.CCCGCGCTGCCGTCTCGGGGCGTCTGTCTGGGCGAATCTTTTCGATCTTTCTGCCGCGCCGGGACCGAAAACGGCCCGGAAA  >  NC_014034/2165771‑2165954

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG