| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,609,080 | +C | 97.5% | intergenic (+19/‑152) | clpB → / → dinB | chaperone ClpB/DNA polymerase IV |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,609,080 | 1 | .→C | 97.5% | 6.8 ‑1.1 ‑0.5 | 202 | intergenic (+19/‑152) | clpB/dinB | chaperone ClpB/DNA polymerase IV |
| Reads supporting (aligned to +/- strand): new base (66/130): ref base (3/2): total (70/132) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.41e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.27e-01 | ||||||||||
Only 100 of 226 total aligned reads displayed.
CCGGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGT.GGGGG.CTCTG.C.CC.CC..GCTTCGCTCCCCCCGGGATATTT.G.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCC > NC_014034/3608982‑3609174
|
ccgGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.c < 2:3041122/101‑1 (MQ=255)
cgGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.c.c > 2:485857/1‑101 (MQ=255)
cgGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.c.c < 2:3149393/101‑1 (MQ=255)
gTCCCGACGGGCTGGTGGTGGGGGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.c.cc.c < 2:564517/101‑1 (MQ=255)
tCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.c.cc.cc < 1:2987774/101‑1 (MQ=255)
ccGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.c.cc.cccg < 2:934516/101‑3 (MQ=255)
ccGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.c.cc.cccg < 1:1912528/101‑3 (MQ=255)
ccGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGCCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.t.cc.cccg > 2:1607959/1‑99 (MQ=255)
cGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.c.cc.cccgc > 2:3327619/1‑98 (MQ=255)
aCGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.c.cc.cccgctt < 1:217467/101‑6 (MQ=255)
cGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTc < 1:1221929/101‑1 (MQ=255)
gggCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCg > 1:2360310/1‑101 (MQ=255)
gCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCt < 1:1086479/101‑1 (MQ=255)
gCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.C.CCTCC..GCTTCGcc > 1:1529764/1‑100 (MQ=255)
gtCGGCGGGATGTTCTTGACCATCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATAGGGGAGT.GGGGGACTCTGCC.CC.CC..GCTGCGTTCCCCCCg < 2:2060110/101‑1 (MQ=255)
tCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCgg < 1:620047/101‑1 (MQ=255)
tCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCgg < 2:371333/101‑1 (MQ=255)
cggcggCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCggg > 2:3475485/1‑101 (MQ=255)
cggcggCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCggg > 2:3780658/1‑101 (MQ=255)
cggcggCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.C.CC.CCA.GCTTCGCTCCCCCCggg > 2:3507351/1‑101 (MQ=255)
gggcAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGata < 2:24822/100‑1 (MQ=255)
cggcAAGTTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGata < 2:939520/101‑1 (MQ=255)
cggcAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGata < 1:4137611/101‑1 (MQ=255)
ggcAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGatat < 2:157847/101‑1 (MQ=255)
gcAAGGTCTCGGACAGCCAGCGAGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATAtt < 2:686361/101‑1 (MQ=38)
cAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATAttt > 1:1954027/1‑101 (MQ=39)
cAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATAttt < 2:2307651/101‑1 (MQ=39)
ggTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTT.g.gg > 2:13873/1‑101 (MQ=39)
gTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGGTATTT.g.ggg > 2:2715043/1‑100 (MQ=255)
gTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTT.g.ggg < 2:1798172/101‑2 (MQ=39)
tcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTT.g.gggcaa < 2:390278/101‑5 (MQ=38)
cGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTT.g.gggcaag > 1:3365667/1‑96 (MQ=38)
ggCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAgg > 2:2261447/1‑101 (MQ=38)
ggCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAgg < 1:3464317/101‑1 (MQ=38)
gccagccaGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGt < 1:45147/101‑1 (MQ=38)
ccagccagCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTa < 2:595088/101‑1 (MQ=38)
ccagccagCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTa < 1:3820453/101‑1 (MQ=38)
agccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaa < 1:1894487/101‑1 (MQ=38)
agccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaa < 2:2019359/101‑1 (MQ=38)
agccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaa < 2:833525/101‑1 (MQ=38)
gccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaaa < 2:4181559/101‑1 (MQ=38)
gccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaaa < 2:3922983/101‑1 (MQ=38)
cagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGc > 2:1219191/1‑101 (MQ=37)
cagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGc < 2:2964739/101‑1 (MQ=38)
gcgcGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAt < 2:3633770/101‑1 (MQ=37)
cgcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAtt < 1:636511/101‑1 (MQ=38)
cgcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTG.CTCC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAtt < 2:3658930/101‑1 (MQ=38)
gcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTg < 1:2679810/101‑1 (MQ=38)
cggccAGACGGAATCGCGGGTGCTGATCTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTgg < 2:1250934/98‑2 (MQ=21)
cgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGc < 2:3423334/101‑1 (MQ=38)
cgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGc < 2:4020654/101‑1 (MQ=38)
gTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGcc > 2:947762/1‑101 (MQ=37)
tCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGccc > 2:268771/1‑101 (MQ=37)
cAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCtt < 1:1301628/101‑1 (MQ=38)
cAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCtt < 2:2578148/101‑1 (MQ=38)
aGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCttt > 1:1738050/1‑101 (MQ=37)
ccGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATc < 1:1546955/101‑1 (MQ=38)
cGAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCt < 2:3743359/101‑1 (MQ=38)
gAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGTTATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt > 1:4009239/1‑101 (MQ=37)
gAACCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt < 2:3018973/101‑1 (MQ=38)
aaCCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTg < 1:2102559/101‑1 (MQ=38)
aaCCGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTg < 1:3296614/101‑1 (MQ=38)
ccGCGCGTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGcc < 1:2245367/101‑1 (MQ=38)
cgcgcgTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCt < 2:3375864/101‑1 (MQ=38)
cgcgcgTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCACTGCCCTTTATCTTGCCt > 1:1132770/1‑101 (MQ=37)
gcgcgTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTc < 1:3100585/101‑1 (MQ=38)
cgcgTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCa < 1:2606972/101‑1 (MQ=38)
gcgTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAg < 2:1048147/101‑1 (MQ=38)
cgTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGa > 1:371677/1‑101 (MQ=37)
gTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGat < 2:1877566/101‑1 (MQ=38)
gTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGat < 1:3536293/101‑1 (MQ=38)
gTGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGat < 2:1529660/101‑1 (MQ=38)
gTGCTGAACTGAGACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGat > 1:2296960/1‑101 (MQ=37)
tGCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGata < 2:1131397/101‑1 (MQ=38)
gCTGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGatat > 1:3003522/1‑101 (MQ=37)
tGAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATcc > 1:3216813/1‑101 (MQ=37)
gAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATccc < 1:1389715/101‑1 (MQ=37)
gAACTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATccc < 1:2962721/101‑1 (MQ=37)
aCTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCgg > 1:4124772/1‑101 (MQ=37)
aCTGATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCgg < 1:902674/101‑1 (MQ=37)
gATACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCGCggggg > 1:699697/1‑101 (MQ=37)
aTACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGt < 1:3324378/101‑1 (MQ=37)
aTACGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGt > 1:1155267/1‑101 (MQ=37)
gcGGGAGT.GGGGGTCTCTGCC.CC.CC..GCTTCGCTCCCCCCGAGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGa < 2:699620/100‑1 (MQ=37)
aCGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGa < 1:2852003/101‑1 (MQ=37)
aCGGGAGTGGGGGG.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGa > 2:2323555/1‑101 (MQ=25)
gagtgggggg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATCGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAttt > 2:4226862/6‑101 (MQ=25)
tgggggg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTgg < 1:2409894/99‑1 (MQ=38)
tgggggg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTgg > 2:1445531/3‑101 (MQ=37)
gggggg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgc > 1:2692011/2‑101 (MQ=37)
ggggg.CTCTG.C.CC.CCCGGCTTCGCTCCCCCCGGGATATTT.GCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTGAAttggcca > 2:3218750/1‑96 (MQ=2)
gggg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgcgc < 1:2153247/101‑1 (MQ=38)
gggg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgcgc < 1:36532/101‑1 (MQ=37)
gggg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgcgc < 1:3760605/101‑1 (MQ=38)
ggg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCa > 2:3278513/1‑101 (MQ=37)
gg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAg > 1:969536/1‑101 (MQ=37)
gg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAg < 2:1028312/101‑1 (MQ=38)
gg.CTCTGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAg < 2:215133/101‑1 (MQ=38)
ctctGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGcc < 1:2731527/101‑1 (MQ=37)
ctctGCC.CC.CC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGcc < 1:343987/101‑1 (MQ=37)
|
CCGGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGT.GGGGG.CTCTG.C.CC.CC..GCTTCGCTCCCCCCGGGATATTT.G.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCC > NC_014034/3608982‑3609174
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|