| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 408,497 | +GCAGA | 100% | intergenic (+115/+33) | glnA1 → / ← dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 408,497 | 1 | .→G | 100.0% | 55.6 | 137 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (80/36): ref base (5/13): total (86/51) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.24e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
| * | NC_014034 | 408,497 | 2 | .→C | 100.0% | 58.7 | 137 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (80/36): ref base (5/14): total (86/51) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.15e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.60e-01 | ||||||||||
| * | NC_014034 | 408,497 | 3 | .→A | 100.0% | 57.7 | 137 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (81/36): ref base (5/14): total (86/51) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.73e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.97e-01 | ||||||||||
| * | NC_014034 | 408,497 | 4 | .→G | 100.0% | 59.0 | 137 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (81/36): ref base (5/14): total (86/51) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.73e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.89e-01 | ||||||||||
| * | NC_014034 | 408,497 | 5 | .→A | 100.0% | 61.7 | 137 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (81/36): ref base (5/15): total (86/51) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.82e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.64e-01 | ||||||||||
Only 100 of 145 total aligned reads displayed.
CTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGCAA.AGACGGGG..G.....GC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGC > NC_014034/408396‑408568
|||||
ctGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACgggg..g > 2:3364425/1‑101 (MQ=255)
gCCCCCAGACCCCGGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gc < 1:3096902/101‑1 (MQ=255)
tcgcctcaCCCCCGGGATATTTGGGGCAAGATAAACCCCAT.CCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCA.AGAGgggg..gca > 1:3326953/8‑99 (MQ=25)
cccccAGCCCCCCGGGATATTTGGGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGACTT.GCTGAAAGC.A.AGACGGGG..G.....Gca < 1:4025070/101‑2 (MQ=25)
cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcaga < 2:1757956/101‑4 (MQ=255)
cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcaga < 1:1377659/101‑4 (MQ=255)
cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcaga < 2:3358852/101‑4 (MQ=255)
cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcaga < 1:2468328/101‑4 (MQ=255)
cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcaga < 1:3679316/101‑4 (MQ=255)
ctaGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcagag < 1:3262211/99‑5 (MQ=255)
ccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcagag < 2:878839/101‑5 (MQ=255)
ccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcagag > 2:2967539/1‑97 (MQ=255)
agcccccgGGGATTTTTGCGGAAAGAGAAAGCCGATGTCCTTAACTTTGCCGAAAATTTCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcagagcc < 1:3196961/98‑7 (MQ=255)
aGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcagagcc > 2:4153993/1‑95 (MQ=255)
aGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAG.AA.AGACGGGG..G.....Gcagagag > 2:3261970/1‑95 (MQ=255)
ccccgGGTATTTTGGCGGAAAAATGAACCCGTTTCCTTTCATCTTCCCAAAAATCCCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcagagccccc < 1:879360/101‑10 (MQ=255)
cccccGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcagagccccc > 1:608292/1‑92 (MQ=25)
ccccGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcagagcccccc < 1:2092163/101‑11 (MQ=25)
ccccGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....Gcagagcccccc > 2:1859944/1‑91 (MQ=25)
cGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaa > 2:1981973/1‑101 (MQ=21)
cGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaa > 1:586166/1‑101 (MQ=21)
cGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaa < 2:962094/101‑1 (MQ=21)
ggCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaaa > 2:1054739/1‑101 (MQ=21)
ggCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaaa > 1:2603345/1‑101 (MQ=21)
gaaaGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaaaa < 2:3597311/99‑1 (MQ=21)
gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaaaa < 2:3675828/101‑1 (MQ=21)
gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaaaa < 2:2454172/101‑1 (MQ=21)
gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaaaa > 2:1244510/1‑101 (MQ=21)
gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaaaa < 1:2277220/101‑1 (MQ=21)
gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCaaaa > 2:3266524/1‑101 (MQ=21)
cAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAg < 2:3143514/101‑1 (MQ=21)
cAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAg > 2:2452975/1‑101 (MQ=21)
aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAgg > 1:342787/1‑101 (MQ=21)
aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAgg > 1:2762653/1‑101 (MQ=21)
aGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACGGGTCGGCAAAAGga > 1:3656808/1‑101 (MQ=18)
aGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGCCGCCAAAAGga > 2:460123/1‑101 (MQ=18)
gATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGGAGAGC.....CCCCCGCACAGGGCGCCAAAAGgac > 2:1508479/1‑101 (MQ=21)
gATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGgac < 2:206684/101‑1 (MQ=21)
gATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGgac < 1:1949175/101‑1 (MQ=21)
gATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGgac > 1:2759788/1‑101 (MQ=21)
aTGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGgacc > 1:17272/1‑101 (MQ=21)
gAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGgaccga > 2:2816777/1‑101 (MQ=21)
gAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGgaccga > 1:2783109/1‑101 (MQ=21)
aGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGgaccgacc > 1:1031664/1‑101 (MQ=21)
gCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCt > 2:2256487/1‑101 (MQ=21)
gCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCt > 1:1513656/1‑101 (MQ=21)
gCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GACAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCt > 2:2825734/1‑101 (MQ=21)
gCCGATGTCCTTCATCTTGCCGCAAATACCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCt < 2:1816251/101‑1 (MQ=21)
ccGATGTCCTTCATTTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGCAA.GAAGGGGG..GCAGA.GC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTc < 1:4182524/101‑1 (MQ=21)
cGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCa > 1:107444/1‑101 (MQ=21)
cGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCa < 2:608228/101‑1 (MQ=21)
cGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCa > 1:2055735/1‑101 (MQ=21)
gATGTCCTTCATCTTGCGGCAAATTCCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAg < 1:30138/101‑1 (MQ=255)
gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAg < 2:2747460/101‑1 (MQ=21)
gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAg < 2:3830015/101‑1 (MQ=21)
gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAg > 1:1212333/1‑101 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGa > 2:409701/1‑101 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGa > 2:2332950/1‑101 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGa < 1:2457365/101‑1 (MQ=21)
tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt < 1:976197/101‑1 (MQ=21)
tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt > 1:1249390/1‑101 (MQ=21)
tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt > 2:2868143/1‑101 (MQ=21)
ggcccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt < 2:2485896/98‑1 (MQ=18)
gcccTTCATCTGGACGCAAATACCACGGGGGGAGGCTT.GCTGAAAGCAAGAGGGGGGGCAGA....GC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATc < 2:1631936/99‑1 (MQ=255)
tCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCa < 1:432479/101‑1 (MQ=21)
tCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCa < 1:1169721/101‑1 (MQ=21)
ccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCTACCTCAGATCAg > 2:3778110/1‑101 (MQ=18)
ccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAg > 1:1998602/1‑101 (MQ=21)
ccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAg > 1:622243/1‑101 (MQ=21)
ttCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGcc > 2:1434319/1‑101 (MQ=21)
cATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg > 2:1424036/1‑101 (MQ=21)
cATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg > 2:2769081/1‑101 (MQ=21)
aTCTTGCGGCAAATATCTCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCgg < 2:2608844/101‑1 (MQ=255)
aTCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAAccccg > 1:782389/1‑99 (MQ=21)
tCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGc > 1:3785937/1‑101 (MQ=21)
tCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGc < 2:1365626/101‑1 (MQ=21)
tGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..G.....GCAGAGGCCCCCCCACAGGTCGCCAAAAGGGCCGACCTCAGATCAGCCCGGCgtg > 1:14229/1‑101 (MQ=21)
gCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtgt < 1:223354/101‑1 (MQ=25)
gCAAATATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGc > 2:3577842/1‑101 (MQ=25)
aaTATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc > 1:701751/1‑101 (MQ=255)
aaTATCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc > 2:1930649/1‑101 (MQ=255)
atatCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcg > 2:1627531/1‑101 (MQ=255)
atatCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcg > 2:3954020/1‑101 (MQ=255)
atCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgcg > 1:2619662/1‑101 (MQ=255)
tCCCGGGGGGAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcgg < 1:472022/101‑1 (MQ=255)
ggggggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc < 1:3803522/101‑1 (MQ=255)
ggggggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc > 1:4003930/1‑101 (MQ=255)
ggggggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGAACTCAGATCAGCCCGGCGTGTTGCATCGCGGCGta > 2:3023796/1‑100 (MQ=255)
gggggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGGGTCa > 2:174247/1‑101 (MQ=255)
gggggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa > 2:256970/1‑101 (MQ=255)
gggggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa > 2:2983468/1‑101 (MQ=255)
gggggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa > 2:193211/1‑101 (MQ=255)
ggggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCaa < 1:4154255/101‑1 (MQ=255)
gggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAg > 2:3722250/1‑101 (MQ=255)
gggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAg > 2:56671/1‑101 (MQ=255)
ggAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgc > 1:380876/1‑101 (MQ=255)
gAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg > 2:383005/1‑101 (MQ=255)
gAGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg > 2:2020580/1‑101 (MQ=255)
aGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcgc > 1:1369964/1‑101 (MQ=255)
aGGCTT.GCTGAAAGC.A.AGACGGGG..GGCAGAGC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcgc > 1:893713/1‑101 (MQ=255)
|||||
CTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTT.GCTGAAAGCAA.AGACGGGG..G.....GC.....CCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGC > NC_014034/408396‑408568
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|