New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1011514 =	186 (0.950)	2 (0.010)	2/184	31.5	0.01	coding (549/639 nt)	RCAP_rcc00918	N‑acetylmuramoyl‑L‑alanine amidase
	?	NC_014034	= 3281216	159 (0.750)					coding (260/591 nt)	RCAP_rcc03088	flavin reductase domain‑containing protein
Rejected: Position hash score below cutoff.

TGCCTGATCGGCGGCGCGGGTTCGGCCGCTACCGATCCCTTCGAGCGGAACTTCACCGCCGCCCAGGATCGCGCCCTGCGCGGCTTGATCGACGCCATCCGCGCCGAG..................................................................................................  <  NC_014034/1011621‑1011514 ....................................................................................................GCGCCGAGCTGACAAGGTTCACGCAAAACACCCCGCTTTCGCGGATCTGCGTCACCGTATCCTTCGTGTCGCCACGGTCGGGCTTTGTCGCGGTCGAGGCAAAGAC  <  NC_014034/3281216‑3281119                                                                                                                                                                                                                                                 GATCCCTTCGAGCGGAACTTCACCGCCGCCCAGGATCGCGCCCTGCGCGGCTTGATCGACGCCATCCGCGCCGAGCTGACAAGGTTCACGCAAAACACCCC                                                                          >  2:2628772/1‑101 (MQ=255)                                    TCCCTTCGAGCGGAACTTCACCGCCGCCCAGGATCGCGCCCTGCGCGGCTTGATCGACGCCATCCGCGCCGAGCTGACAAGGTTCACGCAAAACACCCCGC                                                                        <  1:2628964/101‑1 (MQ=255)                                                                                                                                                                                                                TGCCTGATCGGCGGCGCGGGTTCGGCCGCTACCGATCCCTTCGAGCGGAACTTCACCGCCGCCCAGGATCGCGCCCTGCGCGGCTTGATCGACGCCATCCGCGCCGAG..................................................................................................  <  NC_014034/1011621‑1011514 ....................................................................................................GCGCCGAGCTGACAAGGTTCACGCAAAACACCCCGCTTTCGCGGATCTGCGTCACCGTATCCTTCGTGTCGCCACGGTCGGGCTTTGTCGCGGTCGAGGCAAAGAC  <  NC_014034/3281216‑3281119 Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG