New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1023606207 (1.050)2 (0.010) 2/186 31.7 0.01 coding (564/945 nt) RCAP_rcc00928 hypothetical protein
?NC_014034 1140985 = 160 (0.760)coding (254/660 nt) RCAP_rcc01065 hypothetical protein
Rejected: Position hash score below cutoff.

CCATTGATGGGTCGAGCCCTTCGAGGAGCCCGTCGTTGCGGATTGTCTCGATCCGGTCGAGGTTGTTGGCATAGGACACCTGCGCCCAGACGATATTGCCCAGCGCC....................................................................................................  >  NC_014034/1023500‑1023606
....................................................................................................CAGCGCCAAAGGGCAGGTGTCGGTGTCCCCGGCGTCGGGGGGCGGCGCCGTCACCGGCCCTTGCGCCTGCGGCCTGAGTTCCGGTTCCGGCAGAAGCGGGGCCCCCT  >  NC_014034/1140985‑1141084
                                                                                                                                                                                                               
                                 CGTTGCGGATTGTCTCGATCCGGTCGAGGTTGTTGGCATAGGACACCTGCGCCGAGACGATATTGCCCAGCGCCAAAGGGCAGGTGTCGGTGTCCCCGGCG                                                                           >  1:633060/1‑101 (MQ=255)
                                     GCGGATTGTCTCGATCCGGTCGAGGTTGTTGGCATAGGACCCCTGCGCCGAGACGATATTGCCCAGCGCCAAAGGGCAGGTGTCGGTGTCCCCGGCGTCGG                                                                       <  2:632996/101‑1 (MQ=255)
                                                                                                                                                                                                               
CCATTGATGGGTCGAGCCCTTCGAGGAGCCCGTCGTTGCGGATTGTCTCGATCCGGTCGAGGTTGTTGGCATAGGACACCTGCGCCCAGACGATATTGCCCAGCGCC....................................................................................................  >  NC_014034/1023500‑1023606
....................................................................................................CAGCGCCAAAGGGCAGGTGTCGGTGTCCCCGGCGTCGGGGGGCGGCGCCGTCACCGGCCCTTGCGCCTGCGGCCTGAGTTCCGGTTCCGGCAGAAGCGGGGCCCCCT  >  NC_014034/1140985‑1141084

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 20 ≤  ATCG  < 26 ≤  ATCG  < 35 ≤  ATCG