New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1077412189 (0.950)2 (0.010) 2/188 31.8 0.01 coding (624/1659 nt) RCAP_rcc00985 hypothetical protein
?NC_014034 = 2518627 204 (0.960)coding (125/624 nt) pdxH pyridoxal 5'‑phosphate synthase
Rejected: Position hash score below cutoff.

ATCCATGCTGCCGTCGGGCGGGCCGACCTTCAGCGCGGCGCGATAGATCCAGTTCCAAAGCTTGGTGCGCTGCTCGGGGCTGCGCACCTGTTCGTCGTTCTCGATG....................................................................................................  >  NC_014034/1077307‑1077412
....................................................................................................TCGATGCCGCGGGGCTGCCCAATGTGCGCATGGTGCTTTTGAAAGAGATCGAGGGGCGGGATGCGCCCTCGGGCGGGGCGTTCCTGTTCTACACCAATTACGGCTC  <  NC_014034/2518627‑2518528
                                                                                                                                                                                                              
                                                         AAGCTTGGTGCGCTGCTCGGGGCTGCGCACCTGTTCGTCGTTCTCGATGCCGCGGGGCTGCCCAATGTGCGCATGGTGCTTTTGAAAGAGATCGAGGGGCG                                                  >  1:1387719/1‑101 (MQ=255)
                                                                     CTGCTCGGGGCTGCGCACCTGTTCGTCGTTCTCGATGCCGCGGGGCTGCCCATTGTGCGCATGGTGCTTTTGAAAGAGATCGAGGGGCGGGATGCGCCCTC                                      <  2:1387619/101‑1 (MQ=255)
                                                                                                                                                                                                              
ATCCATGCTGCCGTCGGGCGGGCCGACCTTCAGCGCGGCGCGATAGATCCAGTTCCAAAGCTTGGTGCGCTGCTCGGGGCTGCGCACCTGTTCGTCGTTCTCGATG....................................................................................................  >  NC_014034/1077307‑1077412
....................................................................................................TCGATGCCGCGGGGCTGCCCAATGTGCGCATGGTGCTTTTGAAAGAGATCGAGGGGCGGGATGCGCCCTCGGGCGGGGCGTTCCTGTTCTACACCAATTACGGCTC  <  NC_014034/2518627‑2518528

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 23 ≤  ATCG  < 29 ≤  ATCG  < 38 ≤  ATCG