New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1081699163 (0.830)2 (0.010) 2/186 31.7 0.01 coding (244/447 nt) RCAP_rcc00993 hypothetical protein
?NC_014034 1712857 = 176 (0.830)coding (613/1050 nt) RCAP_rcc01582 hypothetical protein
Rejected: Position hash score below cutoff.

TCGGTCATCCGGTCGATGTCGATCGGCACCGCGCCCCAGGCGGCGCCATAGCGCGACCGGATGAAGGCGTTCAGCCCCTTCGCGCCCGCCACATTCGCGACGCCCGC....................................................................................................  >  NC_014034/1081593‑1081699
....................................................................................................CGCCCGCTGCGGTAGGCCTCGGGCAGGGCCCGGCCGCTGCCATCGACCCAGACCGTCTGCGCGATCCGGTCGGGGTCGGGGGCGCGGGGGCGGTGCACGCCCAGCTT  >  NC_014034/1712857‑1712956
                                                                                                                                                                                                               
                                   CCAGGCGGCGCCATAGCGCGACCGGATGAAGGCGTTCAGCCCCTTCGCGCCCGCCACATTCGCGACGCCCGCTGCGGTAGGCCTCGGGCAGGGCCCGGCCG                                                                         >  2:2556112/1‑101 (MQ=255)
                                                                        ccCCCCTTCGCCCCCGCCACATTCGCGACGCCCGCTGCGGTAGGCCTCGGGCAGGGCCCGGCCGCTGCCATCGACCCAGACCGTCTGCGCGATCCGGTCGG                                    <  1:2556303/99‑1 (MQ=255)
                                                                                                                                                                                                               
TCGGTCATCCGGTCGATGTCGATCGGCACCGCGCCCCAGGCGGCGCCATAGCGCGACCGGATGAAGGCGTTCAGCCCCTTCGCGCCCGCCACATTCGCGACGCCCGC....................................................................................................  >  NC_014034/1081593‑1081699
....................................................................................................CGCCCGCTGCGGTAGGCCTCGGGCAGGGCCCGGCCGCTGCCATCGACCCAGACCGTCTGCGCGATCCGGTCGGGGTCGGGGGCGCGGGGGCGGTGCACGCCCAGCTT  >  NC_014034/1712857‑1712956

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG