New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1088945 =	198 (1.040)	2 (0.010)	2/180	31.1	0.01	coding (664/852 nt)	RCAP_rcc01004	ParB domain‑containing protein nuclease
	?	NC_014034	= 3142014	207 (0.980)					intergenic (‑163/+34)	RCAP_rcc02953/RCAP_rct00042	phage integrase/tRNA‑Ser
Rejected: Position hash score below cutoff.

CCGTCTGGTGGGCACCAAGACCGCCTCGAACCAGTCGGAAATCAAGGCGCTGTCCGAGCAAAGCCCGGCCCGACAAGAGCGGATCATGGACATGTTGCTGAGCGATCCGC....................................................................................................  <  NC_014034/1089054‑1088945 ....................................................................................................AGCGATCCGCTAATATCCGGTTTTTCAACGGAAATTCCCCGCTTTTCGTCTTCCTGCGTTTGCGTTTGTCCGCTCAGGTTTGCCAGAATCCGCGTTTTGTGTTAGGGATT  <  NC_014034/3142014‑3141915                                                                                                                                                                                                                                                   CAGTCGGAAATCAAGGCGCTGTCCGAGCAAAGCCCGGCCCGACAAGAGCGGATCATGGACATGTTGCTGAGCGATCCGCTAATATCCGGTTTTTCAACGGA                                                                                >  1:3196332/1‑101 (MQ=255)                                CAGTCGGAAATCAAGGCGCTGTCCGAGCAAAGCCCGGCCCGACAAGAGCGGATCATGGACATGTTGCTGAGCGATCCGCTAATATCCGGTTTTTCAACGGA                                                                                <  2:3196093/101‑1 (MQ=255)                                                                                                                                                                                                                    CCGTCTGGTGGGCACCAAGACCGCCTCGAACCAGTCGGAAATCAAGGCGCTGTCCGAGCAAAGCCCGGCCCGACAAGAGCGGATCATGGACATGTTGCTGAGCGATCCGC....................................................................................................  <  NC_014034/1089054‑1088945 ....................................................................................................AGCGATCCGCTAATATCCGGTTTTTCAACGGAAATTCCCCGCTTTTCGTCTTCCTGCGTTTGCGTTTGTCCGCTCAGGTTTGCCAGAATCCGCGTTTTGTGTTAGGGATT  <  NC_014034/3142014‑3141915 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG