New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1099879267 (1.380)2 (0.010) 2/182 31.3 0.01 coding (811/843 nt) ugpE sn‑glycerol‑3‑phosphate transport system permease UgpE
?NC_014034 2391088 = 194 (0.920)coding (312/843 nt) RCAP_rcc02216 hypothetical protein
Rejected: Position hash score below cutoff.

ACAGCGACACCGCGCTGACCGCCTGCAGCCCGCCCGCATAGGTCTTGCCCACGTCCTTCAGGGTCATCTCGGCCATCATTTGTCGCTTTCGGTCAGGCCCTTGACGAA....................................................................................................  >  NC_014034/1099772‑1099879
...................................................................................................CTTGACGAACAGGCGGAAATCGGCGCGATCGACATTCCGGACGATGAGTTCCATGCCGTTCAGCACGCGCTTGCGGCGGCCCTGCGCATCGGCATCGGCCATCGGATTG  >  NC_014034/2391088‑2391187
                                                                                                                                                                                                                
                                                                 ATCTCGGCCATCATTTGTCGCTTTCGGTCAGGCCCTTGACGAACAGGCGGAAATCGGCGCGATCGACATTCCGGACGATGAGTTCCATGCCGTTCAGCACG                                            >  1:923004/1‑101 (MQ=255)
                                                                       GCCATCATTTGTCGCTTTCGGTCAGGCCCTTGACGAACAGGCGGAAATCGGCGCGATCGACATTCCGGACGATGAGTTCCATGCCGTTCAGCACGCGCTTG                                      <  2:922919/101‑1 (MQ=255)
                                                                                                                                                                                                                
ACAGCGACACCGCGCTGACCGCCTGCAGCCCGCCCGCATAGGTCTTGCCCACGTCCTTCAGGGTCATCTCGGCCATCATTTGTCGCTTTCGGTCAGGCCCTTGACGAA....................................................................................................  >  NC_014034/1099772‑1099879
...................................................................................................CTTGACGAACAGGCGGAAATCGGCGCGATCGACATTCCGGACGATGAGTTCCATGCCGTTCAGCACGCGCTTGCGGCGGCCCTGCGCATCGGCATCGGCCATCGGATTG  >  NC_014034/2391088‑2391187

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG