New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1158954 =195 (1.010)2 (0.010) 2/182 31.3 0.01 coding (1599/2013 nt) RCAP_rcc01086 family 2 glycosyl transferase
?NC_014034 2652137 = 174 (0.820)coding (455/549 nt) bsaA2 glutathione peroxidase
Rejected: Position hash score below cutoff.

CAGGGGCATCAGGCCGATGTCCATCTGGCAGATCAGCTCCGCCTCGGTGTCTTCGCTCCAGGCCCTGAAATCGAAACACCCCTGCGCCCCCGGCGGCTCGCCCGCGCCG....................................................................................................  <  NC_014034/1159062‑1158954
....................................................................................................CCCGCGCCGTCCAGCAGCACCTTGTTGAAGTTCCAGTTCGGCACGAACCCCCGCGTCTGGCGCAGCCACCGATAAAACGGATGCGCCGCTTCCCCGAGGAGGAGGACGG  >  NC_014034/2652137‑2652236
                                                                                                                                                                                                                 
                                  AGCTCCGCCTCGGTGTCTTCGCTCCAGGCCCTGAAATCGAAACACCCCTGCGCCCCCGGCGGCTCGCCCGCGCCGTCCAGCAGCACCTTGTTGAAGTTCCA                                                                            >  1:3670222/1‑101 (MQ=255)
                                            CGGTGTCTTCGCTCCAGGCCCTGAAATCGAAACACCCCTGCGCCCCCGGCGGCTCGCCCGCGCCGTCCAGCAGCACCTTGTTGAAGTTCCAGTTCGGCACG                                                                  <  2:3669969/101‑1 (MQ=255)
                                                                                                                                                                                                                 
CAGGGGCATCAGGCCGATGTCCATCTGGCAGATCAGCTCCGCCTCGGTGTCTTCGCTCCAGGCCCTGAAATCGAAACACCCCTGCGCCCCCGGCGGCTCGCCCGCGCCG....................................................................................................  <  NC_014034/1159062‑1158954
....................................................................................................CCCGCGCCGTCCAGCAGCACCTTGTTGAAGTTCCAGTTCGGCACGAACCCCCGCGTCTGGCGCAGCCACCGATAAAACGGATGCGCCGCTTCCCCGAGGAGGAGGACGG  >  NC_014034/2652137‑2652236

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG