| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 1178307 = | 235 (1.210) | 2 (0.010) | 2/184 | 31.5 | 0.01 | intergenic (‑90/+30) | RCAP_rcc01103/RCAP_rcc01104 | hypothetical protein/hypothetical protein |
| ? | NC_014034 | 1395966 = | 201 (0.950) | intergenic (+778/‑153) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
GACCGGATGACCGCCGCTATCGACGATGTCGAGACCGTGGCCCATGGTCGCGAATTGCTCACCGTCCTTGCGGGATAGCCCCTCAGCCTGAGGCAGTTGCTGGACTGG.................................................................................................... < NC_014034/1178414‑1178307
....................................................................................................TGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGCCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAG > NC_014034/1395966‑1396065
tGAATTGCTCACCGTCCTTGCGGGATAGCCCCTCAGCCTGAGGCAGTTGCTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATC < 2:1994185/100‑1 (MQ=255)
GAATTGCTCACCGTCCTTGCGGGATAGCCCCTCAGCCTGAGGCAGTTGCTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCa > 1:1994311/1‑100 (MQ=255)
GACCGGATGACCGCCGCTATCGACGATGTCGAGACCGTGGCCCATGGTCGCGAATTGCTCACCGTCCTTGCGGGATAGCCCCTCAGCCTGAGGCAGTTGCTGGACTGG.................................................................................................... < NC_014034/1178414‑1178307
....................................................................................................TGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCCTCACGCCTGCCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAG > NC_014034/1395966‑1396065
Base quality scores:
ATCG
< 3 ≤
ATCG
< 30 ≤
ATCG
< 33 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|