New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1209938	197 (1.000)	2 (0.010)	2/186	31.7	0.01	coding (268/990 nt)	RCAP_rcc01139	hypothetical protein
	?	NC_014034	= 3438085	181 (0.850)					intergenic (‑2/+71)	RCAP_rcc03239/RCAP_rcc03240	AsnC/Lrp family transcriptional regulator/ATPase AAA
Rejected: Position hash score below cutoff.

GGTGCGCGACAAGCTTTTCTGCACCACCTTCCCCAAGGCCAGCGGCGCCACGCCGCGCCATCTGTGGGTGGACGAGCTGCCCCGCATCGCCGAGGGCTACAGGCCCG....................................................................................................  >  NC_014034/1209832‑1209938 ....................................................................................................AGGCCCGCGATGCGTTGCGTTTTCGTCCAGTTCCGTTGCCAGCCCGGCAAGACCTATGCCGTGGCCGATGCCATCTATGAACGCGAGGTGGTGAGCGAGCTTTATTC  <  NC_014034/3438085‑3437986                                                                                                                                                                                                                                                CCCAAGGCCAGCGGCGCCACGCCGCGCCATCTGTGGGTGGACGAGCTGCCCCGCATCGCCGAGGGCTACAGGCCCGCGATGCGTTGCGTTTTCGTCCAGTT                                                                             >  1:1592215/1‑101 (MQ=255)                                                                              TGCCCCGCATCGCCGAGGGCTACAGGCCCGCGATGCGTTGCGTTTTCGTCCAGTTCCGTTGCCAGCCCGGCAAGACCTATGCCGTGGCCGATGCCATCTAT                               <  2:1592106/101‑1 (MQ=255)                                                                                                                                                                                                                 GGTGCGCGACAAGCTTTTCTGCACCACCTTCCCCAAGGCCAGCGGCGCCACGCCGCGCCATCTGTGGGTGGACGAGCTGCCCCGCATCGCCGAGGGCTACAGGCCCG....................................................................................................  >  NC_014034/1209832‑1209938 ....................................................................................................AGGCCCGCGATGCGTTGCGTTTTCGTCCAGTTCCGTTGCCAGCCCGGCAAGACCTATGCCGTGGCCGATGCCATCTATGAACGCGAGGTGGTGAGCGAGCTTTATTC  <  NC_014034/3438085‑3437986 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG