New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1227772 =211 (1.090)2 (0.010) 2/182 31.3 0.01 coding (1080/1599 nt) ccoN cbb3‑type cytochrome c oxidase subunit I
?NC_014034 2241584 = 161 (0.760)coding (947/2040 nt) RCAP_rcc02074 ferredoxin domain‑containing protein
Rejected: Position hash score below cutoff.

GTGTAGTGCGAGAGCGAGTTGACCGCCTTGATCGACATCATCGGGCCTTCAAAGGTCGACATGCCGTAAAAGCCGATCGAAACCACCATCATCCGGATCACCGGATCG....................................................................................................  <  NC_014034/1227879‑1227772
...................................................................................................ACCGGATCGAGGCCGAGCAAAAGATGGTGCATGACCGGATTGCAGACGATCACCGCCTCGACCACCGCGGCGGCCTCGATCCCGGCCTCAAGCGCCAGCGCCTCGGCCA  >  NC_014034/2241584‑2241683
                                                                                                                                                                                                                
                             GATCGACATCATCGGGCCTTCAAAGGTCGACATGCCGTAAAAGCCGATCGAAACCACCATCATCCGGATCACCGGATCGAGGCCGAGCAAAAGATGGTGCA                                                                                >  1:564049/1‑101 (MQ=255)
                                  ACATCATCGGGCCTTCAAAGGTCGACATGCCGTAAAAGCCGATCGAAACCACCATCATCCGGATCACCGGATCGAGGCCGAGCAAAAGATGGTGCATGACC                                                                           <  2:563985/101‑1 (MQ=255)
                                                                                                                                                                                                                
GTGTAGTGCGAGAGCGAGTTGACCGCCTTGATCGACATCATCGGGCCTTCAAAGGTCGACATGCCGTAAAAGCCGATCGAAACCACCATCATCCGGATCACCGGATCG....................................................................................................  <  NC_014034/1227879‑1227772
...................................................................................................ACCGGATCGAGGCCGAGCAAAAGATGGTGCATGACCGGATTGCAGACGATCACCGCCTCGACCACCGCGGCGGCCTCGATCCCGGCCTCAAGCGCCAGCGCCTCGGCCA  >  NC_014034/2241584‑2241683

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG