New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1228394	220 (1.130)	2 (0.010)	2/184	31.5	0.01	coding (91/729 nt)	ccoO	cbb3‑type cytochrome c oxidase subunit II
	?	NC_014034	= 3474661	199 (0.940)					coding (296/1386 nt)	nifN	nitrogenase molybdenum‑iron cofactor biosynthesis protein NifN
Rejected: Position hash score below cutoff.

AATAAGGAGCGACGCAGATGTCAATCATGGACAAACACCACGTTCTGGAAAAGAACGCGACGCTGCTTTTGATCTTCGCCTTCCTCGTCGTCACCATCGGCGGCATCG....................................................................................................  >  NC_014034/1228287‑1228394 ....................................................................................................CGGCATCGCCTCCACCGCGCTGACCGAAACCCGGGGCGAGGATATCGCGGGCGAATTGCGCGCGATGCAGGCCCGGCGCAAGGATTGGGCCGGGACCGCGGTCGTCCA  <  NC_014034/3474661‑3474562                                                                                                                                                                                                                                                         ACGTTCTGGAAAAGAACGCGACGCTGCTTTTGATCTTCGCCTTCCTCGTCGTCACCATCGGCGGCATCGCCTCCACCGCGCTGACCGAAACCCGGGGCGAG                                                                      >  2:107371/1‑101 (MQ=255)                                                                    TTTGATCTTCGCCTTCCTCGTCGTCACCATCGGCGGCATCGCCTCCACCGCGCTGACCGAAACCCGGGGCGAGGATATCGCGGGCGAATTGCGCGCGATGC                                          <  1:107395/101‑1 (MQ=255)                                                                                                                                                                                                                  AATAAGGAGCGACGCAGATGTCAATCATGGACAAACACCACGTTCTGGAAAAGAACGCGACGCTGCTTTTGATCTTCGCCTTCCTCGTCGTCACCATCGGCGGCATCG....................................................................................................  >  NC_014034/1228287‑1228394 ....................................................................................................CGGCATCGCCTCCACCGCGCTGACCGAAACCCGGGGCGAGGATATCGCGGGCGAATTGCGCGCGATGCAGGCCCGGCGCAAGGATTGGGCCGGGACCGCGGTCGTCCA  <  NC_014034/3474661‑3474562 Base quality scores:  ATCG  < 3 ≤  ATCG  < 32 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG