New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1234211142 (0.760)2 (0.010) 2/176 30.8 0.01 coding (1849/2229 nt) ccoI cbb3‑type cytochrome c oxidase biogenesis protein CcoI
?NC_014034 3696630 = 169 (0.800)coding (689/900 nt) hemS hemin transport protein HmuS
Rejected: Position hash score below cutoff.

GTGGCGCTTCTGACCGCGCAGGGCAAGCGGGTGCTGATGGTCTCGGGCGATGTCGAGACGGCGGTTTCGGCGCTGGCGGGCAAGCTTGGCATCACCGAATGGCATTCGGGCG....................................................................................................  >  NC_014034/1234100‑1234211
....................................................................................................GGCATTCGGGCGTGATCGTCCGGGTGCTGGAGGCCGGGCCCTGGATCAACGTCCTCGATCCGGGGCTGGAGCTGCATCTGCGCATGGACCACATGGTCGAAATCTGGGCGCA  >  NC_014034/3696630‑3696729
                                                                                                                                                                                                                    
                                                 ATGTCGAGACGGCGGTTTCGGCGCTGGCGGGCAAGCTTGGCATCACCGAATGGCATTCGGGCGTGATCGGCCGGGTGCTGGAGGCCGGGCCCTGGATCCAC                                                                >  1:3802499/1‑101 (MQ=255)
                                                                       GCTGGCGGGCAAGCTTGCCATCACCGAATGGCATTCGGGCGTGATCGTCCGGGTGCTGGAGGCCGGGCCCTGGATCAACGTCCTCGATCCGGGGCTGGAGC                                          <  2:3802242/101‑1 (MQ=255)
                                                                                                                                                                                                                    
GTGGCGCTTCTGACCGCGCAGGGCAAGCGGGTGCTGATGGTCTCGGGCGATGTCGAGACGGCGGTTTCGGCGCTGGCGGGCAAGCTTGGCATCACCGAATGGCATTCGGGCG....................................................................................................  >  NC_014034/1234100‑1234211
....................................................................................................GGCATTCGGGCGTGATCGTCCGGGTGCTGGAGGCCGGGCCCTGGATCAACGTCCTCGATCCGGGGCTGGAGCTGCATCTGCGCATGGACCACATGGTCGAAATCTGGGCGCA  >  NC_014034/3696630‑3696729

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 39 ≤  ATCG