| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | = 123697 | 256 (1.340) | 2 (0.010) | 2/180 | 31.1 | 0.01 | intergenic (+121/‑106) | RCAP_rcc00117/RCAP_rcc00118 | ABC transporter ATP‑binding protein/sigma 54 modulation protein/ribosomal protein S30EA |
| ? | NC_014034 | 413807 = | 173 (0.820) | coding (664/1047 nt) | RCAP_rcc00383 | FAD dependent oxidoreductase | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
CAAAGGATGCGTTCGGGCAGTTGACAGCCCCGCCGTTCCGTTCCCAAATACGGGGTATGTGCACCAACGCACCCTCGCCCCGTTTCCCGTTCGGCCCGATTCCCGGCCCG.................................................................................................... > NC_014034/123588‑123697
....................................................................................................TCCCGGCCCGGTGCCGCAGATCTTTGCCGATGGCGTGCTGGTGGTGCCGCATGCGAATGGCACCGTCGGCGTCGGCTCGACCGCCGAGCGGAGTTACACCGACCCGACCG > NC_014034/413807‑413906
TGCACCAACGCACCCTCGCCCCGTTTCCCGTTCGGCCCGATTCCCGGCCCGGTGCCGCAGATCTTTGCCGATGGCGTGCTGGTGGTGCCGCATGCGAATGG > 2:2588864/1‑101 (MQ=255)
CGCACCCTCGCCCCGTTTCCCGTTCGGCCCGATTCCCGGCCCGGTGCCGCAGATCTTTGCCGATGGCGTGCTGGTGGTGCCGCATGCGAATGGCACCGTCG < 1:2589055/101‑1 (MQ=255)
CAAAGGATGCGTTCGGGCAGTTGACAGCCCCGCCGTTCCGTTCCCAAATACGGGGTATGTGCACCAACGCACCCTCGCCCCGTTTCCCGTTCGGCCCGATTCCCGGCCCG.................................................................................................... > NC_014034/123588‑123697
....................................................................................................TCCCGGCCCGGTGCCGCAGATCTTTGCCGATGGCGTGCTGGTGGTGCCGCATGCGAATGGCACCGTCGGCGTCGGCTCGACCGCCGAGCGGAGTTACACCGACCCGACCG > NC_014034/413807‑413906
Base quality scores:
ATCG
< 3 ≤
ATCG
< 23 ≤
ATCG
< 28 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|