New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1306279201 (1.040)2 (0.010) 2/182 31.3 0.01 coding (660/660 nt) RCAP_rcc01235 pyrimidine 5'‑nucleotidase
?NC_014034 = 1789303 186 (0.880)coding (152/426 nt) RCAP_rcc01652 hypothetical protein
Rejected: Position hash score below cutoff.

TTCTGCATACGCTTGTATACGAGCGCGCAGAGTCGCGTCAAGTTGTCGCGCGGGACAGGGTTAGAATTATTTTAACCCGACCTGTCCCGAGAGCGAGACAGCGGGCCCT....................................................................................................  >  NC_014034/1306171‑1306279
....................................................................................................GCGGGCCCTGGGCGCTGAAATCGGGCACCTATTACGAGGTCGAGATCACCGCCGACGGCTCGGGCGAGATCGGGCTTGCGGGCGGTGATTTCTTTCGCGCGATCTGGGT  <  NC_014034/1789303‑1789204
                                                                                                                                                                                                                 
                                                                      TTTAACCCGACCTGTCCCGAGAGCGAGACAGCGGGCCCTGGGCGCTGAAATCGGGCACCTATTACGAGGTCGAGATCACCGCCGACGGCTCGGGCGAGATC                                        >  2:2747878/1‑101 (MQ=255)
                                                                          ACCCGACCTGTCCCGAGAGCGAGACAGCGGGCCCTGGGCGCTGAAATCGGGCACCTATTACGAGGTCGAGATCACCGCCGACGGCTCGGGCGAGATCGGGC                                    <  1:2748084/101‑1 (MQ=255)
                                                                                                                                                                                                                 
TTCTGCATACGCTTGTATACGAGCGCGCAGAGTCGCGTCAAGTTGTCGCGCGGGACAGGGTTAGAATTATTTTAACCCGACCTGTCCCGAGAGCGAGACAGCGGGCCCT....................................................................................................  >  NC_014034/1306171‑1306279
....................................................................................................GCGGGCCCTGGGCGCTGAAATCGGGCACCTATTACGAGGTCGAGATCACCGCCGACGGCTCGGGCGAGATCGGGCTTGCGGGCGGTGATTTCTTTCGCGCGATCTGGGT  <  NC_014034/1789303‑1789204

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG