New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1339988 =	213 (1.100)	2 (0.010)	2/182	31.3	0.01	intergenic (+37/+16)	res/RCAP_rcc01262	type III restriction‑modification system RcaSBIIP Res subunit/recombinase
	?	NC_014034	= 2835330	198 (0.930)					coding (3322/3384 nt)	putA	bifunctional protein PutA
Rejected: Position hash score below cutoff.

AGCAAGGCGACCGGAATTTCGCGGCAAGCCATCCTGCGGATAAGAGAGAACCCGGCGCAGGCCGAGGCCGCTCTAGCACGGTGGGGGATGTGAGGCGAAAGTTGCGCAT....................................................................................................  <  NC_014034/1340096‑1339988 ....................................................................................................GTTGCGCATGAACGCCATCTCTGCGTCGACACGACGGCCGCGGGCGGCAATGCGGCTTTGCTGGCCGGGTGACTTGCCCTTTGCGCCCGCCTGCGGCACTTTGCAGCAC  <  NC_014034/2835330‑2835231                                                                                                                                                                                                                                                                           ctAGGCCGAGGCCGCTCTAGCACGGTGGGGGATGTGAGGCGAAAGTTGCGCATGAACGCCATCTCTGCGTCGACACGACGGCCGCGGGCGGCAATGCGGCT                                                      <  1:2176973/99‑1 (MQ=255)                                                           AGGCCGAGGCCGCTCTAGCACGGTGGGGGATGTGAGGCGAAAGTTGCGCATGAACGCCATCTCTGCGTCGACACGACGGCCGCGGGCGGCAATGCGGCTag                                                    >  2:2176828/1‑99 (MQ=255)                                                                                                                                                                                                                   AGCAAGGCGACCGGAATTTCGCGGCAAGCCATCCTGCGGATAAGAGAGAACCCGGCGCAGGCCGAGGCCGCTCTAGCACGGTGGGGGATGTGAGGCGAAAGTTGCGCAT....................................................................................................  <  NC_014034/1340096‑1339988 ....................................................................................................GTTGCGCATGAACGCCATCTCTGCGTCGACACGACGGCCGCGGGCGGCAATGCGGCTTTGCTGGCCGGGTGACTTGCCCTTTGCGCCCGCCTGCGGCACTTTGCAGCAC  <  NC_014034/2835330‑2835231 Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 40 ≤  ATCG