New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1368059 =181 (0.930)2 (0.010) 2/184 31.5 0.01 coding (2049/2427 nt) mcrB McrBC restriction endonuclease system subunit McrB
?NC_014034 2467659 = 190 (0.900)coding (683/1764 nt) RCAP_rcc02292 signal transduction histidine kinase
Rejected: Position hash score below cutoff.

GATGCTCGCGGTCGAAGAAGTATTCTATGCGGGCGTTCAGCGTGGCAAGCAGCTTTTGCAAGTTCACTCCGCCGCAATCGACAGGCAGAACCGAGGCGTCGGGCATG....................................................................................................  <  NC_014034/1368165‑1368059
...................................................................................................CGGGCATGCGCTGAGCGATCTGGCGGGCGCGCGCGGCGAGAGCTTTCTGGACAGGGCCCCCGATGGCCAAAGACATGCCTTCGCCGTCGTGCCGCTCTGGCCGGGCGA  >  NC_014034/2467659‑2467758
                                                                                                                                                                                                               
                                                               TCACTCCGCCGCAATCGACAGGCAGAACCGAGGCGTCGGGCATGCGCTGAGCGATCTGGCGGGCGCGCGCGGCGAGAGCTTTCTGGACAGGGCCCCCGATG                                             >  1:2588342/1‑101 (MQ=255)
                                                                             TCGACAGGCAGAACCGAGGCGTCGGGCATGCGCTGAGCGATCTGGCGGGCGCGCGCGGCGAGAGCTTTCTGGACAGGGCCCCCGATGGCCAAAGACATGCC                               <  2:2588151/101‑1 (MQ=255)
                                                                                                                                                                                                               
GATGCTCGCGGTCGAAGAAGTATTCTATGCGGGCGTTCAGCGTGGCAAGCAGCTTTTGCAAGTTCACTCCGCCGCAATCGACAGGCAGAACCGAGGCGTCGGGCATG....................................................................................................  <  NC_014034/1368165‑1368059
...................................................................................................CGGGCATGCGCTGAGCGATCTGGCGGGCGCGCGCGGCGAGAGCTTTCTGGACAGGGCCCCCGATGGCCAAAGACATGCCTTCGCCGTCGTGCCGCTCTGGCCGGGCGA  >  NC_014034/2467659‑2467758

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG