New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1436691 =211 (1.030)2 (0.010) 2/194 32.3 0.01 coding (1513/1794 nt) RCAP_rcc01335 Fis family GAF modulated sigma54 specific transcriptional regulator
?NC_014034 = 2765898 175 (0.830)coding (438/1014 nt) RCAP_rcc02578 iron(III) ABC transporter periplasmic iron(III)‑compound‑binding protein
Rejected: Position hash score below cutoff.

GCGAAATTCCGGCGGCAGGGAGCGGACGTCGATCAACCCTGTAGGCGAGAGCGCATCAAGCGTTGCGATCAGATGGGTCATCTCGAGCAGATTGCCCGGCCA....................................................................................................  <  NC_014034/1436792‑1436691
...................................................................................................CCATTTCGGATCGGCAAGTTCTTCATAGGTGATCGCGGTCAGGCCCAGATCCTTGGCGGCATAAACGACGCGTGCCCGCATCGACAGCGCCACCCACTGGTTT  <  NC_014034/2765898‑2765799
                                                                                                                                                                                                          
                        GACGTCGATCAACCCTGTAGGCGAGAGCGCATCAAGCGTTGCGATCAGATGGGTCATCTCGAGCAGATTGCCCGGCCATTTCGGATCGGCAAGTTCTTCAT                                                                               >  2:1526662/1‑101 (MQ=255)
                                             CGAGAGCGCATCAAGCGTTGCGATCAGATGGGTCATCTCGAGCAGATTGCCCGGCCATTTCGGATCGGCAAGTTCTTCATAGGTGATCGCGGTCAGGCCCA                                                          <  1:1526766/101‑1 (MQ=255)
                                                                                                                                                                                                          
GCGAAATTCCGGCGGCAGGGAGCGGACGTCGATCAACCCTGTAGGCGAGAGCGCATCAAGCGTTGCGATCAGATGGGTCATCTCGAGCAGATTGCCCGGCCA....................................................................................................  <  NC_014034/1436792‑1436691
...................................................................................................CCATTTCGGATCGGCAAGTTCTTCATAGGTGATCGCGGTCAGGCCCAGATCCTTGGCGGCATAAACGACGCGTGCCCGCATCGACAGCGCCACCCACTGGTTT  <  NC_014034/2765898‑2765799

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG