New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1456370 =224 (1.150)2 (0.010) 2/184 31.5 0.01 coding (421/483 nt) cheW1 chemotaxis protein CheW
?NC_014034 = 2648828 169 (0.800)coding (576/648 nt) RCAP_rcc02467 GntR family transcriptional regulator
Rejected: Position hash score below cutoff.

CTTGATCTTGATCGTCAGCTTCATGGTCGTCTCACTTTGTTCGGTTCAAGCCGCCTGTTCGGGACGGAAGAGGTTTTCGGGATCGAGAAGGAGAATGAGGTCGTCGCC....................................................................................................  <  NC_014034/1456477‑1456370
....................................................................................................TCGTCGCCCGCCCGCAGCGCTGCCAGAATCAGCCGGTGATGGCGCGGCGGCTCGGTGCGGGGGAACTTGCCATGCAGCTGCCGCATCGTCGGCCCCAGCTGCAGCCAG  <  NC_014034/2648828‑2648729
                                                                                                                                                                                                                
                                       TTCGGTTCAAGCCGCCTGTTCGGGACGGAAGAGGTTTTCGGGATCGAGAAGGAGAATGAGGTCGTCGCCCGCCCGCAGCGCTGCCAGAATCAGCCGGTGAT                                                                      >  1:3812099/1‑101 (MQ=255)
                                                    GCCTGTTCGGGACGGAAGAGGTTTTCGGGATCGAGAAGGAGAATGAGGTCGTCGCCCGCCCGCAGCGCTGCCAGAATCAGCCGGTGATGGCGCGGCGGCTC                                                         <  2:3811842/101‑1 (MQ=255)
                                                                                                                                                                                                                
CTTGATCTTGATCGTCAGCTTCATGGTCGTCTCACTTTGTTCGGTTCAAGCCGCCTGTTCGGGACGGAAGAGGTTTTCGGGATCGAGAAGGAGAATGAGGTCGTCGCC....................................................................................................  <  NC_014034/1456477‑1456370
....................................................................................................TCGTCGCCCGCCCGCAGCGCTGCCAGAATCAGCCGGTGATGGCGCGGCGGCTCGGTGCGGGGGAACTTGCCATGCAGCTGCCGCATCGTCGGCCCCAGCTGCAGCCAG  <  NC_014034/2648828‑2648729

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG