New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1461173 =187 (0.960)2 (0.010) 2/184 25.1 0.01 coding (978/1107 nt) cheB1 chemotaxis response regulator protein‑glutamate methylesterase CheB
?NC_014035 = 47952 130 (0.920)coding (923/1011 nt) RCAP_rcp00062 TAXI family TRAP transporter solute receptor
Rejected: Position hash score below cutoff.

GCCGCGGGCAGCTGGCCAAGCGACATTTCCTGGCCCACGGCGCCGCGCGCCATCGCCTCTTTCGGCATGCCGTAGACGACGCAGCTTTCCTCGTCCTGGCCCAGCGTG....................................................................................................  <  NC_014034/1461280‑1461173
....................................................................................................CCAGCGTGATGAACTTGCCCTTGGAATGTCCGTTGGCAAACAGCTTCTGGGTGGTCTCGTTGAACATCGCCTTGGTGATGCCGTAGACCAGCTCTTCGGAGAGATCGG  <  NC_014035/47952‑47853
                                                                                                                                                                                                                
                                                  CATCGCCTCTTTCGGCATGCCGTAGACGACGCAGCTTTCCTCGTCCTGGCCCAGCGTGATGAACTTGCCCTTGGAATGTCCGTTGGCAAACAGCTTCTGGG                                                           >  1:2683760/1‑101 (MQ=255)
                                                                   TGCCGTAGACGACGCAGCTTTCCTCGTCCTGGCCCAGCGTGATGAACTTGCCCTTGGAATGTCCGTTGGCAAACAGCTTCTGGGTGGTCTCGTTGAACATC                                          <  2:2683554/101‑1 (MQ=255)
                                                                                                                                                                                                                
GCCGCGGGCAGCTGGCCAAGCGACATTTCCTGGCCCACGGCGCCGCGCGCCATCGCCTCTTTCGGCATGCCGTAGACGACGCAGCTTTCCTCGTCCTGGCCCAGCGTG....................................................................................................  <  NC_014034/1461280‑1461173
....................................................................................................CCAGCGTGATGAACTTGCCCTTGGAATGTCCGTTGGCAAACAGCTTCTGGGTGGTCTCGTTGAACATCGCCTTGGTGATGCCGTAGACCAGCTCTTCGGAGAGATCGG  <  NC_014035/47952‑47853

Base quality scores:  ATCG  < 3 ≤  ATCG  < 32 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG