New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1467374189 (0.990)2 (0.010) 2/180 31.1 0.01 coding (705/1560 nt) leuA 2‑isopropylmalate synthase
?NC_014034 1948237 = 160 (0.760)coding (1683/2472 nt) quiP acyl‑homoserine‑lactone acylase
Rejected: Position hash score below cutoff.

GGCTCAGATGCATGATCTTCGTCGTGTCGATGCCGGTGGTGAAGGGCATCAGATCCTTGCGGACCTTGATCGCCATCACGACTTCTTCCAGCGCAGTGTTGCCCGCGCGC....................................................................................................  >  NC_014034/1467265‑1467374
....................................................................................................GCCCGCGCGCGGCCGGGGAAACCGTGTCGGTCTGCACCGCGATGAAGCTTTCGCGCGAATGCACTTCGCGCTCGCCCATCAGCCGGGTCAGGCGCGCGACGCGCTGGCTG  >  NC_014034/1948237‑1948336
                                                                                                                                                                                                                  
                                     GGTGAAGGGCATCAGATCCTTGCGGACCTTGATCGCCATCACGACTTCTTCCAGCGCAGTGTTGCCCGCGCGCGGCCGGGGAAACCGTGTCGGTCTGCACC                                                                          >  1:175012/1‑101 (MQ=255)
                                                                   GATCGCCATCACGACTTCTTCCAGCGCAGTGTTGCCCGCGCGCGGCCGGGGAAACCGTGTCGGTCTGCACCGCGATGAAGCTTTCGCGCGAATGCACTTCG                                            <  2:174974/101‑1 (MQ=255)
                                                                                                                                                                                                                  
GGCTCAGATGCATGATCTTCGTCGTGTCGATGCCGGTGGTGAAGGGCATCAGATCCTTGCGGACCTTGATCGCCATCACGACTTCTTCCAGCGCAGTGTTGCCCGCGCGC....................................................................................................  >  NC_014034/1467265‑1467374
....................................................................................................GCCCGCGCGCGGCCGGGGAAACCGTGTCGGTCTGCACCGCGATGAAGCTTTCGCGCGAATGCACTTCGCGCTCGCCCATCAGCCGGGTCAGGCGCGCGACGCGCTGGCTG  >  NC_014034/1948237‑1948336

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG