New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1468818 =	181 (0.920)	2 (0.010)	2/186	31.7	0.01	coding (1017/1467 nt)	RCAP_rcc01364	signal transduction histidine kinase
	?	NC_014034	2773034 =	178 (0.840)					coding (2039/2412 nt)	lon	ATP‑dependent protease La
Rejected: Position hash score below cutoff.

AGAGTTTCGAGGCGCCGCAGGCGCCGCTCTGGGTGGCGCTGGATGAAAACCAGTTCATCACCGCGCTGGTCAATCTGGTCGTCAACGCCCGCGATGCGATGCCGGGC....................................................................................................  <  NC_014034/1468924‑1468818 ....................................................................................................GCCGGGCTGGCGATGGTGACCTCGATCGTCTCGGTTCTGACCGGCATTCCGGTGCGCAAGGACATCGCGATGACCGGGGAAGTGTCGCTTCGCGGCAATGCGATGCC  >  NC_014034/2773034‑2773133                                                                                                                                                                                                                                                                           CACTGCGCTGGTCAATCTGGTCGTCAACGCCCGCGACGCGATGCCGGGCTGGCGATGGTGACCTCGATCGTCTCGGTTCTGACCGGCATTCCGGTGCGCAA                                                  >  1:1870818/1‑101 (MQ=255)                                                                         ATCTGGTCGTCAACGCCCGCGATGCGATGCCGGGCTGGCGATGGTGACCTCGATCGTCTCGGTTCTGACCGGCATTCCGGTGCGCAAGGACATCGCGATGA                                    <  2:1870698/101‑1 (MQ=255)                                                                                                                                                                                                                 AGAGTTTCGAGGCGCCGCAGGCGCCGCTCTGGGTGGCGCTGGATGAAAACCAGTTCATCACCGCGCTGGTCAATCTGGTCGTCAACGCCCGCGATGCGATGCCGGGC....................................................................................................  <  NC_014034/1468924‑1468818 ....................................................................................................GCCGGGCTGGCGATGGTGACCTCGATCGTCTCGGTTCTGACCGGCATTCCGGTGCGCAAGGACATCGCGATGACCGGGGAAGTGTCGCTTCGCGGCAATGCGATGCC  >  NC_014034/2773034‑2773133 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG