New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1473412 =	128 (0.760)	15 (0.090)	9/156	22.3	0.10	intergenic (+119/+100)	nadE/RCAP_rcc01367	NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
	?	NC_014034	2190534 =	156 (0.740)					intergenic (+109/+131)	RCAP_rcc02031/cobB	hypothetical protein/cobyrinic acid A,C‑diamide synthase
Rejected: Position hash score below cutoff.

GGCGGCGGTTGGGGGTCTAGGCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC....................................................................................................  <  NC_014034/1473531‑1473412 ....................................................................................................TCGGCCAGCGCCCGCCCCGCCCCCGGCGGGCGCTTCTCGCCCGCCAGGACGGGCGCCGGCCTCTGTCACGCTTGCAGCAGGCGGTCTTTGCAACGCAGTGGCGACCCGGGCGGGCAAAGG  >  NC_014034/2190534‑2190633                                                                                                                                                                                                                                                  GCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCC                                                                                                     <  2:3101676/101‑1 (MQ=1)                      CCCCTGCCGTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCC                                                                                                    <  2:524555/101‑1 (MQ=1)                      CCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCCCCC                                                                                                    >  2:1385584/1‑101 (MQ=1)                       CCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGGCCCGCCCC                                                                                                   >  2:527185/1‑101 (MQ=1)                       CCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCCCCCCCCCCC                                                                                                   >  1:3702154/1‑101 (MQ=0)                          TGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCCCcg                                                                                                >  1:159173/1‑99 (MQ=11)                          TGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCCCCCCCcg                                                                                                >  1:3853978/1‑99 (MQ=11)                           GCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCCCGGC                                                                                               >  1:1590226/1‑101 (MQ=32)                           GCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCCCGGC                                                                                               >  2:2337688/1‑101 (MQ=32)                           GCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCCCCCCCccc                                                                                               >  1:1433256/1‑98 (MQ=2)                             CCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCCCCCCGCCCCCCGCGG                                                                                             >  2:3734914/1‑101 (MQ=12)                              CTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCCCGGCGGG                                                                                            >  1:4052303/1‑101 (MQ=32)                              CTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCCCCCCCCGCGGG                                                                                            >  1:2134296/1‑101 (MQ=12)                               TTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCCCCCCCCGCGGGg                                                                                           >  2:3082617/1‑100 (MQ=12)                                TTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCCCGGCGGGCG                                                                                          >  2:2947390/1‑101 (MQ=32)                                     ACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCCCCCCGCCCCCGGCGGGGGCcggc                                                                                     >  1:952145/1‑97 (MQ=255)                                      CCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCCCCGCGGGCGCaggcc                                                                                    >  2:1158829/1‑96 (MQ=12)                                         AGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCCCCCCCGGCGGGCGCTcggctct                                                                                 >  1:979631/1‑94 (MQ=255)                                                                                                                                                                                                                              GGCGGCGGTTGGGGGTCTAGGCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC....................................................................................................  <  NC_014034/1473531‑1473412 ....................................................................................................TCGGCCAGCGCCCGCCCCGCCCCCGGCGGGCGCTTCTCGCCCGCCAGGACGGGCGCCGGCCTCTGTCACGCTTGCAGCAGGCGGTCTTTGCAACGCAGTGGCGACCCGGGCGGGCAAAGG  >  NC_014034/2190534‑2190633 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG