New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1506259 =185 (0.970)2 (0.010) 2/180 31.1 0.01 coding (557/777 nt) RCAP_rcc01398 hypothetical protein
?NC_014034 2998293 = 181 (0.850)coding (717/1071 nt) RCAP_rcc02806 hypothetical protein
Rejected: Position hash score below cutoff.

TGCACGACGCCTGCCGCCGCGCATGGGCGCCCGGACTGGCAGGAGGGCTTTGGCGAGATGCGGGCGCGGTTCTGGCCGGACACCGGTCGGCTGCGCGTCTGGCTGCGCCA....................................................................................................  <  NC_014034/1506368‑1506259
....................................................................................................GGCTGCGCCAATGGCCGTAATCGATCACCAGCGCGACGCCGCCATGGGTGGCGATGCGGCGGGCGATTTCCCCCATGATCGGCGCGGCGGCGGGACAGGTTTCCACCACA  >  NC_014034/2998293‑2998392
                                                                                                                                                                                                                  
                                  ACTGGCAGGAGGGCTTTGGCGAGATGCGGGCGCGGTTCTGGCCGGACACCGGTCGGCTGCGCGTCTGGCTGCGCCAATGGCCGGAATCGATCACCAGCCCG                                                                             >  1:1452113/1‑101 (MQ=255)
                                                              GGCGCGGTTCTGGCCGGACACCGGTCGGCTGCGCGTCTGGCTGCGCCAATGGCCGTAATCGATCACCAGCGCGACGCCGCCATGGGTGGCGATGCGGCGGG                                                 <  2:1452011/101‑1 (MQ=255)
                                                                                                                                                                                                                  
TGCACGACGCCTGCCGCCGCGCATGGGCGCCCGGACTGGCAGGAGGGCTTTGGCGAGATGCGGGCGCGGTTCTGGCCGGACACCGGTCGGCTGCGCGTCTGGCTGCGCCA....................................................................................................  <  NC_014034/1506368‑1506259
....................................................................................................GGCTGCGCCAATGGCCGTAATCGATCACCAGCGCGACGCCGCCATGGGTGGCGATGCGGCGGGCGATTTCCCCCATGATCGGCGCGGCGGCGGGACAGGTTTCCACCACA  >  NC_014034/2998293‑2998392

Base quality scores:  ATCG  < 3 ≤  ATCG  < 9 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 39 ≤  ATCG