New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 152792189 (0.990)2 (0.010) 2/180 31.1 0.01 coding (529/822 nt) RCAP_rcc00142 hypothetical protein
?NC_014034 668512 = 172 (0.810)coding (578/1860 nt) RCAP_rcc00621 signal transduction histidine kinase
Rejected: Position hash score below cutoff.

CTTCACCCGCCACATGCTGAGCACGCTGCAGGCCTATGCGCCGGACCGGTTCGACACGCTGGTGACCGAGTTGCGCGTGGCCTGGGTGGCACGGATGCGCGGGCTTCTGG....................................................................................................  >  NC_014034/152683‑152792
....................................................................................................GGGCTTCTGGTCTTCCTGCATCTGATCGAGGCGGCGACCCTGTCCCAGTCCCTGCAGGTTCCGGTGCGGCTCGATTTCTCGGCGTTCTCGCCGGTGCCGGTGGTGGTCGG  >  NC_014034/668512‑668611
                                                                                                                                                                                                                  
                                                                              GGCCTGGGTGGCACGGATGCGCGGGCTTCTGGTCTTCCTGCATCTGATCGAGGCGGCGACCCTGTCCCAGTCCCTGCAGGTTCCGGTGCGGCTCGATTTCT                                 >  2:1279609/1‑101 (MQ=255)
                                                                               GCCTGGGTGGCACGGATGCGCGGGCTTCTGGTCTTCCTGCATCTGATCGAGGCGGCGACCCTGTCCCAGTCCCTGCAGGTTCCGGTGCGGCTCGATTTCTC                                <  1:1279705/101‑1 (MQ=255)
                                                                                                                                                                                                                  
CTTCACCCGCCACATGCTGAGCACGCTGCAGGCCTATGCGCCGGACCGGTTCGACACGCTGGTGACCGAGTTGCGCGTGGCCTGGGTGGCACGGATGCGCGGGCTTCTGG....................................................................................................  >  NC_014034/152683‑152792
....................................................................................................GGGCTTCTGGTCTTCCTGCATCTGATCGAGGCGGCGACCCTGTCCCAGTCCCTGCAGGTTCCGGTGCGGCTCGATTTCTCGGCGTTCTCGCCGGTGCCGGTGGTGGTCGG  >  NC_014034/668512‑668611

Base quality scores:  ATCG  < 3 ≤  ATCG  < 32 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG