New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1528304202 (1.040)2 (0.010) 2/184 31.5 0.01 coding (906/1263 nt) RCAP_rcc01418 hypothetical protein
?NC_014034 1709647 = 196 (0.930)coding (332/1041 nt) pyrC2 dihydroorotase
Rejected: Position hash score below cutoff.

CCGCAGCGCCCAGAACCATATCGCTGGTGTTGGTGATCCCGCCCGCCGCGGCGGCCGAGCTCCATTCCAGCTCGGGGATCTGCCAGGGACGCACCACCTGCACGCCC....................................................................................................  >  NC_014034/1528198‑1528304
...................................................................................................GCACGCCCGAATGGGAATTCGTGGTGGCGCCTGCCGGGTAAAGCTTCACCGCTTTCACCAGACCCGAGGCCGCCGCCGCCGCGACATCGGCGGGATCGGTGGTTTCGG  >  NC_014034/1709647‑1709746
                                                                                                                                                                                                               
                                  GATCCCGCCCGCCGCGGCGGCCGAGCTCCATTCCAGCTCGGGGATCTGCCAGGGACGCACCACCTGCACGCCCGAATGGGAATTCGTGGTGGCGCCTGCCG                                                                          >  1:2517600/1‑101 (MQ=255)
                                                        GAGCTCCATTCCAGCTCGGGGATCTGCCAGGGACGCACCACCTGCACGCCCGAATGGGAATTCGTGGTGGCGCCTGCCGGGTAAAGCTTCACCGCTTTCAC                                                    <  2:2517416/101‑1 (MQ=255)
                                                                                                                                                                                                               
CCGCAGCGCCCAGAACCATATCGCTGGTGTTGGTGATCCCGCCCGCCGCGGCGGCCGAGCTCCATTCCAGCTCGGGGATCTGCCAGGGACGCACCACCTGCACGCCC....................................................................................................  >  NC_014034/1528198‑1528304
...................................................................................................GCACGCCCGAATGGGAATTCGTGGTGGCGCCTGCCGGGTAAAGCTTCACCGCTTTCACCAGACCCGAGGCCGCCGCCGCCGCGACATCGGCGGGATCGGTGGTTTCGG  >  NC_014034/1709647‑1709746

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG