New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1529195	212 (1.090)	3 (0.020)	2/184	31.5	0.01	coding (15/1263 nt)	RCAP_rcc01418	hypothetical protein
	?	NC_014034	= 3375284	195 (0.920)					coding (208/1236 nt)	RCAP_rcc03176	PAS/PAC sensor domain‑containing protein
Rejected: Position hash score below cutoff.

CGCCGCCGATGTCGATGCCAAAGCAGTGCTTGCCATCGGGCAGGCCGGTGAGCGGATCGACCGAGACGGCTTCAAGGATCTGGTGGTTGTTCGCATGACGCGTGTTC....................................................................................................  >  NC_014034/1529089‑1529195 ...................................................................................................GCGTGTTCCGCATCCTGTGGAGTGCGCTGGGCGCAGGCCATCCGATGGGCGCCTATGTCAAGAACCGCGTCCGCAACGGCGATATCTACTGGGTCTTCGCCGTCCTGA  <  NC_014034/3375284‑3375185                                                                                                                                                                                                                           GTCGATGCCAAAGCAGTGCTTGCCATCGGGCAGGCCGGTGAGCGGATCGACCGAGACGGCTTCAAGGATCTGGTGGTTGTTCGCATGACGCGTGTTCCCCA                                                                                                  >  2:2440688/1‑101 (MQ=255)                                GCCATCGGGCAGGCCGGTGAGCGGATCGACCGAGACGGCTTCAAGGATCTGGTGGTTGTTCGCATGACGCGTGTTCCGCATCCTGTGGAGTGCGCTGGGCG                                                                             >  1:1288169/1‑101 (MQ=255)                                        GCAGGCCGGTGAGCGGATCGACCGAGACGGCTTCAAGGATCTGGTGGTTGTTCGCATGACGCGTGTTCCGCATCCTGTGGAGTGCGCTGGGCGCAGGCCAT                                                                     <  2:1288073/101‑1 (MQ=255)                                                                                                                                                                                                                 CGCCGCCGATGTCGATGCCAAAGCAGTGCTTGCCATCGGGCAGGCCGGTGAGCGGATCGACCGAGACGGCTTCAAGGATCTGGTGGTTGTTCGCATGACGCGTGTTC....................................................................................................  >  NC_014034/1529089‑1529195 ...................................................................................................GCGTGTTCCGCATCCTGTGGAGTGCGCTGGGCGCAGGCCATCCGATGGGCGCCTATGTCAAGAACCGCGTCCGCAACGGCGATATCTACTGGGTCTTCGCCGTCCTGA  <  NC_014034/3375284‑3375185 Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG