New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1544445	199 (1.060)	2 (0.010)	2/178	30.9	0.01	coding (854/900 nt)	RCAP_rcc01432	AraC family transcriptional regulator
	?	NC_014034	2350855 =	201 (0.950)					intergenic (‑188/‑12)	RCAP_rcc02178/RCAP_rcc02179	hypothetical protein/AzlC protein family
Rejected: Position hash score below cutoff.

CGCGGGGGTGAAACGGGCGCTTCTGGCCTCGGAGATGATGATTGCCGATGTCGCGATGCAGTTCGGCTTTGCCGATCAGGCGCATCTGACGCGGGCCTTTCGCCGCCACGA...................................................................................................  >  NC_014034/1544335‑1544445 ....................................................................................................CGCCGCCACGACGCGAGGAACGCATGACCGACACCCCCCGTTTCCGCGACGGTGCCCTGGCCGCCATCCCCTTGATCCTGGGGTATTTTCCCATCGCCTTTTCCTTCGGC  >  NC_014034/2350855‑2350953                                                                                                                                                                                                                                                                                         TGCCGATCAGGCGCATCTGACGCGGGCCTTTCGCCGCCACGACGCGAGGAACGCATGACCGACACCCCCCGTTTCCGCGACGGTGCCCTGGCCGCCATCCC                                          <  1:3866051/101‑1 (MQ=255)                                                                       GCCGATCAGGCGCATCTGACGCGGGCCTTTCGCCGCCACGACGCGAGGAACGCATGACCGACACCCCCCGTTTCCGCGACGGTGCCCTGGCCGCCATCCCa                                         >  2:3865792/1‑100 (MQ=255)                                                                                                                                                                                                                    CGCGGGGGTGAAACGGGCGCTTCTGGCCTCGGAGATGATGATTGCCGATGTCGCGATGCAGTTCGGCTTTGCCGATCAGGCGCATCTGACGCGGGCCTTTCGCCGCCACGA...................................................................................................  >  NC_014034/1544335‑1544445 ....................................................................................................CGCCGCCACGACGCGAGGAACGCATGACCGACACCCCCCGTTTCCGCGACGGTGCCCTGGCCGCCATCCCCTTGATCCTGGGGTATTTTCCCATCGCCTTTTCCTTCGGC  >  NC_014034/2350855‑2350953 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG