New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1598080	180 (0.930)	2 (0.010)	2/182	31.3	0.01	coding (1422/1431 nt)	RCAP_rcc01474	amino acid permease
	?	NC_014034	= 3615305	191 (0.900)					coding (832/1170 nt)	RCAP_rcc03414	hypothetical protein
Rejected: Position hash score below cutoff.

CGTGCAGGCCTTCCCGGTGATCGTGGTCTGCGTCGCGGCCTCGGGTTCGCTTCTTGCGCTGCGGATCAAGCGCAGCCAGCCCGAGCTTTACGCCCGCCTTGGCCGCGCC....................................................................................................  >  NC_014034/1597972‑1598080 ....................................................................................................GGCCGCGCCGTGGCCGGGGCGCTCAATTTCATCGGGCGCGACACATTATATGGCCGCTACTGGGGCTGTCTTGAGGACTACGCCTTCCTGCATTTCGAGCTGTGTTACC  <  NC_014034/3615305‑3615206                                                                                                                                                                                                                                                                            tCTGCGGATCAAGCGCAGCCAGCCCGAGCTTTACGCCCGCCTTGGCCGCGCCGTGGCCGGGGCGCTCAATTTCATCGGGCGCGACACATTATATGGCCGCT                                                     <  2:23497/100‑1 (MQ=255)                                                           CTGCGGATCAAGCGCAGCCAGCCCGAGCTTTACGCCCGCCTTGGCCGCGCCGTGGCCGGGGCGCTCAATTTCATCGGGCGCGACACATTATATGGCCGCTA                                                    >  1:23511/1‑101 (MQ=255)                                                                                                                                                                                                                   CGTGCAGGCCTTCCCGGTGATCGTGGTCTGCGTCGCGGCCTCGGGTTCGCTTCTTGCGCTGCGGATCAAGCGCAGCCAGCCCGAGCTTTACGCCCGCCTTGGCCGCGCC....................................................................................................  >  NC_014034/1597972‑1598080 ....................................................................................................GGCCGCGCCGTGGCCGGGGCGCTCAATTTCATCGGGCGCGACACATTATATGGCCGCTACTGGGGCTGTCTTGAGGACTACGCCTTCCTGCATTTCGAGCTGTGTTACC  <  NC_014034/3615305‑3615206 Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG