New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1604909 =183 (0.940)3 (0.020) 3/184 24.0 0.02 coding (92/1452 nt) murF UDP‑N‑acetylmuramoyl‑tripeptide‑‑D‑alanyl‑D‑ alanine ligase
?NC_014035 92441 = 94 (0.670)coding (407/1971 nt) fhuB3 ferrichrome ABC transporter permease FhuB‑3
Rejected: Position hash score below cutoff.

TCACAAGCGCGCAGGCGGCGCCCTTTTTCAGCGCGTCGGCGACGAAATCATGGCCGTCGCGCACGTCCTTCAGCGCCACGAACATTTCGCCCGGGCGGATCGAGCGGG....................................................................................................  <  NC_014034/1605016‑1604909
....................................................................................................CGAGCGGGGCAAAGCCGCGCCCTGCCGCCAGCGCCATCCCCAGCGCCGTCGCGGCCCCTGCCCCGGCCAGCGCCACCGGCAGATTGCCGCCCGCCAGAAGCTGCGGCG  >  NC_014035/92441‑92540
                                                                                                                                                                                                                
          GCAGGCGGCGCCCTTTTTCAGCGCGTCGGCGACGAAATCATGGCCGTCGCGCACGTCCTTCAGCGCCACGAACATTTCGCCCGGGCGGATCGAGCGGGGgt                                                                                                   >  2:1460725/1‑99 (MQ=255)
                                            AAATCATGGCCGTCGCGCACGTCCTTCAGCGCCACGAACATTTCGCCCGGGCGGATCGAGCGGGGCAAAGCCGCGCCCTGCCGCCAGCGCCATCCCCAGCG                                                                 >  1:69319/1‑101 (MQ=255)
                                                 ATGGCCGTCGCGCACGTCCTTCAGCGCCACGAACATTTCGCCCGGGCGGATCGAGCGGGGCAAAGCCGCGCCCTGCCGCCAGCGCCATCCCCAGCGCCGTC                                                            <  2:69304/101‑1 (MQ=255)
                                                                                                                                                                                                                
TCACAAGCGCGCAGGCGGCGCCCTTTTTCAGCGCGTCGGCGACGAAATCATGGCCGTCGCGCACGTCCTTCAGCGCCACGAACATTTCGCCCGGGCGGATCGAGCGGG....................................................................................................  <  NC_014034/1605016‑1604909
....................................................................................................CGAGCGGGGCAAAGCCGCGCCCTGCCGCCAGCGCCATCCCCAGCGCCGTCGCGGCCCCTGCCCCGGCCAGCGCCACCGGCAGATTGCCGCCCGCCAGAAGCTGCGGCG  >  NC_014035/92441‑92540

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG