New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1646398189 (0.990)2 (0.010) 2/180 31.1 0.01 coding (309/1242 nt) nuoD NADH‑quinone oxidoreductase subunit D
?NC_014034 3475850 = 202 (0.950)coding (677/1569 nt) nifE nitrogenase molybdenum‑iron biosynthesis protein NifE
Rejected: Position hash score below cutoff.

CCGAGAAGCTGATGGAAAGCCGGACCTATCTGCAGAACACGCCCTATTTCGACCGGCTCGACTATGTGGCGCCGATGAACCAGGAACATGCCTGGTGCCTGGCGATCGAG....................................................................................................  >  NC_014034/1646289‑1646398
....................................................................................................GGCGATCGAGCCCAGAATGCGGATGCCGAGCTTGTCGAGCAGCGGCTTCACCTGCCACAGCTCGCCCGACAGGTTGTAATCGCCGATGATGTTGACGTCATAGGGCGTCA  >  NC_014034/3475850‑3475949
                                                                                                                                                                                                                  
                                                   tctGGCTCGACTATGTGGCGCCGATGAACCAGGAACATGCCTGGTGCCTGGCGATCGAGCCCAGAATGCGGATGCCGAGCTTGTCGAGCAGCGGCTTCACC                                                            <  2:2434003/98‑1 (MQ=255)
                                                      GGCTCGACTATGTGGCGCCGATGAACCAGGAACATGCCTGGTGCCTGGCGATCGAGCCCAGAATGCGGATGCCGAGCTTGTCGAGCAGCGGCTTCACCaga                                                         >  1:2434179/1‑98 (MQ=255)
                                                                                                                                                                                                                  
CCGAGAAGCTGATGGAAAGCCGGACCTATCTGCAGAACACGCCCTATTTCGACCGGCTCGACTATGTGGCGCCGATGAACCAGGAACATGCCTGGTGCCTGGCGATCGAG....................................................................................................  >  NC_014034/1646289‑1646398
....................................................................................................GGCGATCGAGCCCAGAATGCGGATGCCGAGCTTGTCGAGCAGCGGCTTCACCTGCCACAGCTCGCCCGACAGGTTGTAATCGCCGATGATGTTGACGTCATAGGGCGTCA  >  NC_014034/3475850‑3475949

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 36 ≤  ATCG  < 41 ≤  ATCG