New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1648077182 (0.910)2 (0.010) 2/188 31.8 0.01 coding (747/1170 nt) nuoE NADH‑quinone oxidoreductase subunit E
?NC_014034 1803359 = 176 (0.830)coding (1742/2124 nt) ligA DNA ligase
Rejected: Position hash score below cutoff.

GGTGGGCGATGGCACGCGCCGGATCGACGGGACCGAGGTGCGGCTTTCCGCCCCATGGCAGGTCTCGGGGCAGATGGGCGCGATCGGTCTGATGACGGCGCGGCCG....................................................................................................  >  NC_014034/1647972‑1648077
....................................................................................................CGGCCGAATGGCAGGAGCTGCTCAGCATCGATGGCGTCGGCGAGACTTTGGCCGCCTCGGTGACCGCGGCCTTTCATCCCGGCGCCGAACGCGACGCGATCGACCG  >  NC_014034/1803359‑1803458
                                                                                                                                                                                                              
                                             TTCCGCCCCATGGCAGGTCTCGGGGCAGATGGGCGCGATCGGTCTGATGACGGCGCGGCCGAATGGCAGGAGCTGCTCAGCATCGATGGCGTCGGCGAGAC                                                              >  2:2024002/1‑101 (MQ=255)
                                                                TCGGGGCAGATGGGCGCGATCGGTCTGATGACGGCGCGGCCGAATGGCAGGAGCTGCTCAGCATCGATGGCGTCGGCGAGACTTTGGCCGCCTCGGTGACC                                           <  1:2024140/101‑1 (MQ=255)
                                                                                                                                                                                                              
GGTGGGCGATGGCACGCGCCGGATCGACGGGACCGAGGTGCGGCTTTCCGCCCCATGGCAGGTCTCGGGGCAGATGGGCGCGATCGGTCTGATGACGGCGCGGCCG....................................................................................................  >  NC_014034/1647972‑1648077
....................................................................................................CGGCCGAATGGCAGGAGCTGCTCAGCATCGATGGCGTCGGCGAGACTTTGGCCGCCTCGGTGACCGCGGCCTTTCATCCCGGCGCCGAACGCGACGCGATCGACCG  >  NC_014034/1803359‑1803458

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG