New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1688781 =	158 (0.820)	3 (0.020)	3/182	30.1	0.02	coding (368/2874 nt)	uvrA	UvrABC system protein A
	?	NC_014034	3314551 =	179 (0.840)					coding (592/624 nt)	RCAP_rcc03118	hypothetical protein
Rejected: Position hash score below cutoff.

CGGATGACGGGGGCCAGCAGATAGCCCCGCGCCCCCTCCTCCATCGCCATGACGCGATCGACCATGTCCTGCACCTGCATCGCCTCGATCGGCAGGCCGGTGGCGGGCG....................................................................................................  <  NC_014034/1688889‑1688781 ....................................................................................................TGGCGGGCGGACAACCTGCGCAAGCTGCTGGCGGCGCTTTGATCAAAGGCGGCGCTGTCAGGGTCGGGAGACGCTCCATCAGGCCGAGGGAACGTCCGCCGGGCCGGGC  >  NC_014034/3314551‑3314650                                                                                                                                                                                                                               GCCAGCAGATAGCCCCGCGCCCCCTCCTCCATCGCCATGACGCGATCGACCATGTCCTGCACCTGCATCGCCTCGATCGGCAGGCCGGGGGCGGGGGGAta                                                                                                  >  1:3157499/1‑99 (MQ=255)                               GCCCCCTCCTCCATCGCCATGACGCGATCGACCATGTCCTGCACCTGCATCGCCTCGATCGGCAGGCCGGTGGCGGGCGGACAACCTGCGCAAGCTGCTGG                                                                                >  2:3952063/1‑101 (MQ=255)                                                                               ATCGCCTCGATCGGCAGGCCGGTGGCGGGCGGACAACCTGCGCAAGCTGCTGGCGGCGCTTTGATCAAAGGCGGCGCTGTCAGGGTCGGGAGACGCTCCAT                                <  1:3952323/101‑1 (MQ=255)                                                                                                                                                                                                                   CGGATGACGGGGGCCAGCAGATAGCCCCGCGCCCCCTCCTCCATCGCCATGACGCGATCGACCATGTCCTGCACCTGCATCGCCTCGATCGGCAGGCCGGTGGCGGGCG....................................................................................................  <  NC_014034/1688889‑1688781 ....................................................................................................TGGCGGGCGGACAACCTGCGCAAGCTGCTGGCGGCGCTTTGATCAAAGGCGGCGCTGTCAGGGTCGGGAGACGCTCCATCAGGCCGAGGGAACGTCCGCCGGGCCGGGC  >  NC_014034/3314551‑3314650 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG