New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1699965 =	32 (0.180)	13 (0.070)	7/164	24.6	0.23	intergenic (+38/+5)	RCAP_rcc01568/purF	RES domain family protein/amidophosphoribosyltransferase
	?	NC_014034	= 2474945	54 (0.250)					intergenic (‑108/+18)	RCAP_rcc02301/engA	hypothetical protein/GTP‑binding protein EngA
Rejected: Position hash score below cutoff.

TCCGCAATATTGCGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GG...................................  <  NC_014034/1700057‑1699965 ..................................................................................................................CCGAGGCGACCCGCGG  <  NC_014034/2474945‑2474930                                                                                                 ||||||||||||||||||                 TCCGCAATATTGCGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.AG.ATcggaag                            >  2:2255665/1‑95 (MQ=0)            GCGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGG.GG.ATTTCGCCTCGGCTGACG                  >  2:4229939/1‑101 (MQ=0)             CGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGGTGT.ATTTCGCCTCGGCTGACGC                 <  1:3909811/101‑1 (MQ=0)              GACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GTTATTTCGCCTCGGCTGACGCC                <  1:2406995/101‑1 (MQ=0)              GACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCC                <  1:582912/101‑1 (MQ=0)               ACGCCTGGTTCTCGGGCGATTATCCGGTGANGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCCG               <  1:1697574/101‑1 (MQ=0)                CGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCCGA              <  2:1695697/101‑1 (MQ=0)                 GCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCCGAG             >  1:2283838/1‑101 (MQ=0)                 GCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCCGAG             >  2:15004/1‑101 (MQ=0)                   CTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCCGAGGC           <  1:1280011/101‑1 (MQ=0)                   CTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCCGAGGC           <  2:2283670/101‑1 (MQ=0)                     GTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGACCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCCGAGGCGA         >  2:56039/1‑101 (MQ=0)                        TCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCCGAGGCGACCC      <  2:2406030/101‑1 (MQ=0)                        TCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCCGAGGCGACCC      <  2:3164969/101‑1 (MQ=0)                            GGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GGTATTTCGCCTCGGCTGACGCCGAGGCGACCCGgcg  <  2:2800946/101‑4 (MQ=12)                                                                                                 ||||||||||||||||||                 TCCGCAATATTGCGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGA.GGG.GG...................................  <  NC_014034/1700057‑1699965 ..................................................................................................................CCGAGGCGACCCGCGG  <  NC_014034/2474945‑2474930 Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG