New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1732710 =	27 (0.170)	13 (0.080)	2/150	28.2	0.19	intergenic (‑134/‑269)	RCAP_rcc01601/tgt	FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase
	?	NC_014034	= 2577169	81 (0.380)					intergenic (+91/‑338)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

AAGGGCGTATTTTGCCTAGGAAAAGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGC..............................................................................................  <  NC_014034/1732831‑1732710 .................................................................................................GCAAATACGCCGGGGGTGCGGGGGCG..GCCCCCGCCGGGTCGCCTTGGCGAAGCCAAGGCGAAACGCTTTCGCGCCCAGGCAAAAGGCCGCCCGAAGGCGGCCGTTTCATCGCGATGT  <  NC_014034/2577169‑2577078                                                                                                                                                                                                                                                AAGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG                                                                                               >  1:616342/1‑101 (MQ=1)                        AGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG..G                                                                                            >  2:3201783/1‑101 (MQ=1)                         GCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG..Ga                                                                                           <  1:1699217/101‑2 (MQ=1)                         GCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG..Ga                                                                                           <  1:660794/101‑2 (MQ=1)                          CGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG..Gag                                                                                          >  1:3585227/1‑99 (MQ=1)                           GGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG..Gagc                                                                                         <  1:2155091/101‑4 (MQ=1)                           GGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG..Gagc                                                                                         <  2:3066972/101‑4 (MQ=1)                           GGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG..Gagc                                                                                         >  2:524084/1‑98 (MQ=1)                            GGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG..Gagcc                                                                                        <  1:382794/101‑5 (MQ=1)                              GCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG..Gagcccc                                                                                      <  1:3122338/101‑7 (MQ=1)                                   TGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCc                                                                                   >  1:3342615/1‑100 (MQ=32)                                   TGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCc                                                                                   >  1:461669/1‑100 (MQ=32)                                   TGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCc                                                                                   <  2:3905086/101‑2 (MQ=32)                                                                                                                                                                                                                          AAGGGCGTATTTTGCCTAGGAAAAGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGC..............................................................................................  <  NC_014034/1732831‑1732710 .................................................................................................GCAAATACGCCGGGGGTGCGGGGGCG..GCCCCCGCCGGGTCGCCTTGGCGAAGCCAAGGCGAAACGCTTTCGCGCCCAGGCAAAAGGCCGCCCGAAGGCGGCCGTTTCATCGCGATGT  <  NC_014034/2577169‑2577078 Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG