New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1776259 =181 (0.900)2 (0.010) 2/190 32.0 0.01 coding (321/2424 nt) RCAP_rcc01642 hypothetical protein
?NC_014034 1776278 = 196 (0.930)coding (302/2424 nt) RCAP_rcc01642 hypothetical protein
Rejected: Position hash score below cutoff.

CAATATTCGAACGACCCCTTGGCGGAACGGGAATGGCCGCTCTCGCATATTCCGGTGATCCTGCATGAAACGGAATGGGAGACGATCTGCGCCGGGCTGACGCAG....................................................................................................  <  NC_014034/1776363‑1776259
....................................................................................................CGCAGATCGTCTCCCATTCCGTTTCATGCAGGATCACCGGAATATGCGAGAGCGGCCATTCCCGTTCCGCCAAGGGGTCGTTCGAATATTGCCGGAAGAAGACGC  >  NC_014034/1776278‑1776377
                                                                                                                                                                                                             
                            GGGAATGGCCGCTCTCGCATATTCCGGTGATCCTGCATGAAACGGAATGGGAGACGATCTGCGCCGGGCTGACGCAGATCGTCTCCCATTCCGTTTCATGC                                                                              >  1:1922648/1‑101 (MQ=255)
                             GGAATGGCCGCTCTCGCATATTCCGGTGATCCTGCATGAAACGGAATGGGAGACGATCTGCGCCGGGCTGACGCAGATCGTCTCCCATTCCGTTTCATGCA                                                                             <  2:1922522/101‑1 (MQ=255)
                                                                                                                                                                                                             
CAATATTCGAACGACCCCTTGGCGGAACGGGAATGGCCGCTCTCGCATATTCCGGTGATCCTGCATGAAACGGAATGGGAGACGATCTGCGCCGGGCTGACGCAG....................................................................................................  <  NC_014034/1776363‑1776259
....................................................................................................CGCAGATCGTCTCCCATTCCGTTTCATGCAGGATCACCGGAATATGCGAGAGCGGCCATTCCCGTTCCGCCAAGGGGTCGTTCGAATATTGCCGGAAGAAGACGC  >  NC_014034/1776278‑1776377

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG